Transcript Information: S_Transcript_77789.p1


Annotated TAIR IDAT3G48030.1
Annotated Gene Namehypoxia-responsive family protein / zinc finger (C3HC4-type RING finger) family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:17725410-17727954 | Reverse length=349
E-Value1.2E-39
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 166.382991845057
Replicate 274.864746588421
Replicate 363.617078400734
Condition 2: 8 Hour
Replicate 158.465115026747
Replicate 258.820366086472
Replicate 361.073495946857
Condition 3: 24 Hour
Replicate 162.343824793381
Replicate 269.26468257041
Replicate 380.200433333122


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_77789.p1 GENE.S_Transcript_77789~~S_Transcript_77789.p1 ORF type:5prime_partial len:89 (+),score=10.73,HIG_1_N|PF04588.9|2.1e-19 S_Transcript_77789:2-268(+)
AAAATGGGTAGTCCGGAACCCAGCATCGATGAATTTTTCCCAGAGCAGAAGCGCGTCAGGAACCCCTTAGTTCCAATTGGTGCATTAATGACTGCTGGAGTTCTAACAGCTGGCTTAATAAGTTTTAGGCAAGGGAATTCACAGTTGGGTCAGAAGCTTATGAGAGCTCGTGTGGTCGTCCAGGGTGCCACTGTTGCGCTCATGGTCGGTACAGCTGCGTATTATGGAGAAAACTTCCCAAAATTTCCAAAGTTCCCTGGCCTTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_77789.p1 GENE.S_Transcript_77789~~S_Transcript_77789.p1 ORF type:5prime_partial len:89 (+),score=10.73,HIG_1_N|PF04588.9|2.1e-19 S_Transcript_77789:2-268(+)
KMGSPEPSIDEFFPEQKRVRNPLVPIGALMTAGVLTAGLISFRQGNSQLGQKLMRARVVVQGATVALMVGTAAYYGENFPKFPKFPGL*

Click here to download the sequence:
Link to NCBI Protein BLAST