Transcript Information: S_Transcript_77833.p1


Annotated TAIR IDAT1G79490.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)EMB2217
Annotation TypeOrtholog
Chromosome Positionchr1:29900617-29903127 | Forward length=836
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 16.4401568825348
Replicate 26.6476257978752
Replicate 37.0445563688249
Condition 2: 8 Hour
Replicate 17.5638098515098
Replicate 27.0857456545753
Replicate 37.661568000367
Condition 3: 24 Hour
Replicate 16.5560563738082
Replicate 26.9362555002344
Replicate 36.9412981043736


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_77833.p1 GENE.S_Transcript_77833~~S_Transcript_77833.p1 ORF type:complete len:843 (+),score=138.61,PPR_2|PF13041.2|5,PPR_2|PF13041.2|0.0011,PPR_2|PF13041.2|5.2e-08,PPR_2|PF13041.2|2.4e-07,PPR_2|PF13041.2|0.033,PPR_2|PF13041.2|6e-07,PPR_2|PF13041.2|2.1e-08,PPR_2|PF13041.2|1.3e-08,PPR_2|PF13041.2|0.016,PPR_2|PF13041.2|2.4,PPR_2|PF13041.2|4.9e+02,PPR_2|PF13041.2|5.7e+02,PPR|PF01535.16|0.088,PPR|PF01535.16|3.2,PPR|PF01535.16|0.0011,PPR|PF01535.16|1.9e-05,PPR|PF01535.16|0.12,PPR|PF01535.16|1.9e-06,PPR|PF01535.16|0.00078,PPR|PF01535.16|0.03,PPR|PF01535.16|0.048,PPR|PF01535.16|3.1,PPR|PF01535.16|4.4e+02,PPR|PF01535.16|1e+04,PPR_3|PF13812.2|22,PPR_3|PF13812.2|1.2e+04,PPR_3|PF13812.2|0.032,PPR_3|PF13812.2|2.5e-05,PPR_3|PF13812.2|3.4e+02,PPR_3|PF13812.2|3.2e-05,PPR_3|PF13812.2|0.1,PPR_3|PF13812.2|0.0023,PPR_3|PF13812.2|2.2,PPR_3|PF13812.2|65,PPR_3|PF13812.2|7e+02,PPR_3|PF13812.2|9.1e+03,PPR_3|PF13812.2|1.2e+04,PPR_1|PF12854.3|1.4e+02,PPR_1|PF12854.3|47,PPR_1|PF12854.3|1.3e-07,PPR_1|PF12854.3|18,PPR_1|PF12854.3|0.0017,PPR_1|PF12854.3|0.0087,PPR_1|PF12854.3|0.089,PPR_1|PF12854.3|0.094,PPR_1|PF12854.3|1.7e+03,TPR_14|PF13428.2|1.5e+04,TPR_14|PF13428.2|7.7e+02,TPR_14|PF13428.2|90,TPR_14|PF13428.2|5e+03,TPR_14|PF13428.2|2e+03,TPR_14|PF13428.2|4.1e+03,TPR_14|PF13428.2|4.1,TPR_14|PF13428.2|1.5e+04,TPR_14|PF13428.2|1.8e+03 S_Transcript_77833:292-2820(+)
ATGCTCTTAAATAATTTCATATATCTCTTTCCCTTTAATGCCATGTTTCATAGTAGAATATTGTGCCGCAAAAGCTTATTTATTCTTACAAAAAATCCTAGGTTATTATCACCATTTTATGTGCAAAATCGACATTTAGTTGCATCTGTAGAAGGAAATGACCATCAAAGACTGTTCAGCCGTGCAAAAGATGATCAGGGTTCTCATTTGATACCTCAAAGTTTTGGTCATTTAGCAAAAAACCACAATTTTTTGAGGAGCTATTGCTCAGGAAAACCTGATAGTGAAAATGGTTCGAGTGAATGGACGGAAGAGATAGAGTATTTAGATGAGTCGGGTAGCCTTATTTTCTCCGGTAAGGGTGTTAGAACTGTTGAGCCTGGCCTCGATGACCATGTCATGTCTGGTGGGGTAAAGAAGCCACTTGTGAATGCTTCAGCTGTTGCCAAGATTGTTGAGATAGTTAAGCGGTGGAAGTGGGGTCCAGAGATGGAAAACCAGCTCGATAAGCTTCAGTTTGTACCCAATATGACTCATGTAATTCAGGCAATGAAAGTGATTAATGATGGTGAAATGTCGGTTAATCTGTTTCAGTGGGCAAAGAAGCAACCTTGGTATGTACCTAATGATGAATGCTATTTGTTGTTGTTAGATGGGTTGAATAAGAACAGGGATATTGATAGGATGCAATTGTTGTTCGATGAAATGATTCGTGATTCTGCTGATAAGAATGGGATGACTTCGTTTAGTGCATATAATCAAGTTATTCAGAATTTAGCTAAGGCAGAGAAGTTAGAGGTTTCGTTTTGTTGTTTTAAGAAGGTTCAGGAATCTGGTCTTAAGATTGAGACCCAGACGTATAATTATCTTATAACCTTGTTTTTGAATAAAGGTTTGCCTTACAAGGCGGTTGAGGTATATGAGAGTATGGAAGCGGCTGGGTGTTTATTGGATGTTTCGACATATGAGTTGATGATACCAAGCTTGGCGAAATCTGGTCGCCTTGATGCTGCCCTTAAACTTTTTGAAGAGATGAAACAGAGGAAATTTCAACCTAGCTTTTCTATTTTTGCGGCATTAGTTGATTTGATGGGGAAGGCTGGGAGGCTGGACATGTCAATTAAGCTGTACATGGAAATGCTGGGTCTTGGATATAGACCTTCTGCGACCATGTTTGTTTCACTCATAGAGTCGTATGTCAAATCAGGGAAGTTAGAAGCAGCTCTTCGGCTTTGGGACGAGATGAAGAAAGCAGGTTTCAGGCCAAACTATGGACTTTATACGATGGTGGTTGAGTCTCATGCTAAATCAGGGAAGCTTGAAATTGCAATGTCTGTTTTCCAGGATATGGAGAAAGCGGGGTTTTTACCTACCCCATCTACCTACTCTTGCCTGTTGGAAATGCACGCTGCCTCAGGACAAGTGGATCCTGCCATGAAGCTGTATAACTCAATGACAAATGCAGGTTTGCGACCAAGTCTGAGCACTTACACTGCACTGTTGACCCTTTTAGCTAATAAGAAACTAGTGGATGTGGCTGCTAAAATTTTACTTGAAATGAAAGCGATGGGATATTCTGCAGATGTTAGTGCTAGTGATGTTCTAATGGTATATATCAAAGATGGGTCAGTTGATACTGCTTTACGGTGGCTTCGTTTTATGAGTTCATCCGGGGTAAGAACCAACAATTTCATCATCCGTCAGCTATTTGAATCGTGCATGAAGAATGGAATGTATGAATCAGCAAAACCACTTCTGGAAACATATGTGAACTCAGCTGCAAAAGTTGATCTCATACTGTACACATCAATTCTGGCTCACCTTGTCAGATGTCAGGATGAACAGAATGAGAAGCACTTGATGTCAATTCTTGGTGCTACAAAGCACAAAGCACATGCCTTCATGTGTGGTCTCTTCACAGGTCCAGAACAAAGGAAACAACCAGTTTTATCTTTTGTTCGGGAGTTCTTTCAGGGAATTGATTATGAATTAGAAGAAGGAGCTACTAGGTATTTTGTTAATGTACTCCTCAACTATCTTGTCCTTATGGGTCAGATAAACCGCGCACGTTGTGTTTGGAAAGTTGCCTATGAGAATAAGCTTTTCCCAAAGGCCATAGTGTTTGATCAACACATTGCATGGTCCCTTGACGTAAGGAACTTATCAGTTGGAGCTGCCCTCATTGCAGTTGTACACACCCTTCACAGGTTCAGAAAACGGATGCTTTATTACGGTGTTGTGCCCAGAAGGATCAAACTTGTTACTGGCCCAACTCTGAAGATCGTGATTGCCCAGATGTTAAGCACGGTTGACTCACCATTTGAGGTTAGTAAGGTTGTTTTGAGAGCTCCAGGAGACTCTGTCTTAGAATGGTTTAAGAAACCTATTGTTCAGAAATTCCTCTTGAATGAGATCCCATCTCGAGCTGATATTCTCATGCACAAGTTGAATATACTTTTTCCTAGTTCTGCACCTGAAATCAGATCTTTATCTCCGCCTAAGCCTCTTGTTGCAGGCAAGGCTCTGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_77833.p1 GENE.S_Transcript_77833~~S_Transcript_77833.p1 ORF type:complete len:843 (+),score=138.61,PPR_2|PF13041.2|5,PPR_2|PF13041.2|0.0011,PPR_2|PF13041.2|5.2e-08,PPR_2|PF13041.2|2.4e-07,PPR_2|PF13041.2|0.033,PPR_2|PF13041.2|6e-07,PPR_2|PF13041.2|2.1e-08,PPR_2|PF13041.2|1.3e-08,PPR_2|PF13041.2|0.016,PPR_2|PF13041.2|2.4,PPR_2|PF13041.2|4.9e+02,PPR_2|PF13041.2|5.7e+02,PPR|PF01535.16|0.088,PPR|PF01535.16|3.2,PPR|PF01535.16|0.0011,PPR|PF01535.16|1.9e-05,PPR|PF01535.16|0.12,PPR|PF01535.16|1.9e-06,PPR|PF01535.16|0.00078,PPR|PF01535.16|0.03,PPR|PF01535.16|0.048,PPR|PF01535.16|3.1,PPR|PF01535.16|4.4e+02,PPR|PF01535.16|1e+04,PPR_3|PF13812.2|22,PPR_3|PF13812.2|1.2e+04,PPR_3|PF13812.2|0.032,PPR_3|PF13812.2|2.5e-05,PPR_3|PF13812.2|3.4e+02,PPR_3|PF13812.2|3.2e-05,PPR_3|PF13812.2|0.1,PPR_3|PF13812.2|0.0023,PPR_3|PF13812.2|2.2,PPR_3|PF13812.2|65,PPR_3|PF13812.2|7e+02,PPR_3|PF13812.2|9.1e+03,PPR_3|PF13812.2|1.2e+04,PPR_1|PF12854.3|1.4e+02,PPR_1|PF12854.3|47,PPR_1|PF12854.3|1.3e-07,PPR_1|PF12854.3|18,PPR_1|PF12854.3|0.0017,PPR_1|PF12854.3|0.0087,PPR_1|PF12854.3|0.089,PPR_1|PF12854.3|0.094,PPR_1|PF12854.3|1.7e+03,TPR_14|PF13428.2|1.5e+04,TPR_14|PF13428.2|7.7e+02,TPR_14|PF13428.2|90,TPR_14|PF13428.2|5e+03,TPR_14|PF13428.2|2e+03,TPR_14|PF13428.2|4.1e+03,TPR_14|PF13428.2|4.1,TPR_14|PF13428.2|1.5e+04,TPR_14|PF13428.2|1.8e+03 S_Transcript_77833:292-2820(+)
MLLNNFIYLFPFNAMFHSRILCRKSLFILTKNPRLLSPFYVQNRHLVASVEGNDHQRLFSRAKDDQGSHLIPQSFGHLAKNHNFLRSYCSGKPDSENGSSEWTEEIEYLDESGSLIFSGKGVRTVEPGLDDHVMSGGVKKPLVNASAVAKIVEIVKRWKWGPEMENQLDKLQFVPNMTHVIQAMKVINDGEMSVNLFQWAKKQPWYVPNDECYLLLLDGLNKNRDIDRMQLLFDEMIRDSADKNGMTSFSAYNQVIQNLAKAEKLEVSFCCFKKVQESGLKIETQTYNYLITLFLNKGLPYKAVEVYESMEAAGCLLDVSTYELMIPSLAKSGRLDAALKLFEEMKQRKFQPSFSIFAALVDLMGKAGRLDMSIKLYMEMLGLGYRPSATMFVSLIESYVKSGKLEAALRLWDEMKKAGFRPNYGLYTMVVESHAKSGKLEIAMSVFQDMEKAGFLPTPSTYSCLLEMHAASGQVDPAMKLYNSMTNAGLRPSLSTYTALLTLLANKKLVDVAAKILLEMKAMGYSADVSASDVLMVYIKDGSVDTALRWLRFMSSSGVRTNNFIIRQLFESCMKNGMYESAKPLLETYVNSAAKVDLILYTSILAHLVRCQDEQNEKHLMSILGATKHKAHAFMCGLFTGPEQRKQPVLSFVREFFQGIDYELEEGATRYFVNVLLNYLVLMGQINRARCVWKVAYENKLFPKAIVFDQHIAWSLDVRNLSVGAALIAVVHTLHRFRKRMLYYGVVPRRIKLVTGPTLKIVIAQMLSTVDSPFEVSKVVLRAPGDSVLEWFKKPIVQKFLLNEIPSRADILMHKLNILFPSSAPEIRSLSPPKPLVAGKAL*

Click here to download the sequence:
Link to NCBI Protein BLAST