Transcript Information: S_Transcript_77941.p1


Annotated TAIR IDAT5G52420.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G23920.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:21281817-21282545 | Forward length=242
E-Value1.9E-80
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 126.087052594169
Replicate 225.114954120807
Replicate 322.160441776342
Condition 2: 8 Hour
Replicate 119.133848229206
Replicate 221.929717243685
Replicate 319.209538553106
Condition 3: 24 Hour
Replicate 128.752356531098
Replicate 232.696803262319
Replicate 329.409103160116


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_77941.p1 GENE.S_Transcript_77941~~S_Transcript_77941.p1 ORF type:complete len:253 (+),score=43.91 S_Transcript_77941:199-957(+)
ATGTCAGGTGGTGTAGGTCCAACAGGTGACATAAGTCTCCCAAAAGAAGAAGTAGCACCATCATCTTCACAAGATGAAGGCCAAGCCTTCCAAAATCAAAGTTTAAAACACCCCAAAAAGTCAGGCAAAGGTTTCTTATCATTTCGCCAGTTAAACTCTTTAGCCATAATGATTGTCTTAGCTGCTAGTGGTATGGTTAGCCTTGAGGACTTTGCTTTGGTAGTTTTTTCCTTGATATACTTTTACTTTCTCTCTATTGTTGCTTTTCTTACACACTCTCCTAGCCAAGAACAACCTGTTTTTAACCAAAAATCCAAGATCCTTAACCTCTATGTACTTTTTGCTGGGATAATAGGCTTGTTGTTCCCCATTCTCTATATATTAGAAGGCATATTAGAGGGTGATAAAGAGGGGATCAAGGCAGCTGTTCCTCATGTTTTTCTCCTTGCAAGCCAGGTTTTTATGGAAGGTGTTTCTGTTTCGGACCGGTTTTCCTTGCCTATAAGGGTGTTTGTGCCGGTTTTCTATAACTCGAGCCGGCTTTTTACGCTTTTCGATTGGTTCAAAGATGAGATGCTTAAGGTTGGGGAAGGTAGATATGCTGGTTCTGCTAGGAGGTTGTTTGTTGGGAGAGCTCTTGCTGTTGTTAATTTGGGTTTTTGGTGTTTTAATTTGTTTGGTTTCTTGTTGCCTGTGTACCTCCCTAGGGCTTTTAAGAGATATTATGGTGTTGAGGGTTCTACTAGTAAGAAAGAGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_77941.p1 GENE.S_Transcript_77941~~S_Transcript_77941.p1 ORF type:complete len:253 (+),score=43.91 S_Transcript_77941:199-957(+)
MSGGVGPTGDISLPKEEVAPSSSQDEGQAFQNQSLKHPKKSGKGFLSFRQLNSLAIMIVLAASGMVSLEDFALVVFSLIYFYFLSIVAFLTHSPSQEQPVFNQKSKILNLYVLFAGIIGLLFPILYILEGILEGDKEGIKAAVPHVFLLASQVFMEGVSVSDRFSLPIRVFVPVFYNSSRLFTLFDWFKDEMLKVGEGRYAGSARRLFVGRALAVVNLGFWCFNLFGFLLPVYLPRAFKRYYGVEGSTSKKE*

Click here to download the sequence:
Link to NCBI Protein BLAST