Transcript Information: S_Transcript_77988.p1


Annotated TAIR IDAT5G23080.1
Annotated Gene NameSWAP (Suppressor-of-White-APricot)/surp domain-containing protein
Annotated Gene Symbol(s)TGH
Annotation TypeOrtholog
Chromosome Positionchr5:7743226-7748889 | Reverse length=930
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 18.6395024886651
Replicate 29.5344414162955
Replicate 310.029922233357
Condition 2: 8 Hour
Replicate 110.796257102098
Replicate 211.326040282116
Replicate 39.9014114657794
Condition 3: 24 Hour
Replicate 18.5281695464324
Replicate 29.1081079925822
Replicate 38.3985721975282


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_77988.p1 GENE.S_Transcript_77988~~S_Transcript_77988.p1 ORF type:complete len:958 (+),score=273.91,DUF1604|PF07713.9|1.4e-34,DUF1604|PF07713.9|1.6e+04,Surp|PF01805.16|5.5e-09 S_Transcript_77988:176-3049(+)
ATGGATTCCGACGAAGAAGATTTTGTGTTCGTCGGAACACCGATAGAAAGAGAAGAAGAACTCACCAGTCGTAAAAAGAAAGCCCTCGCCGAATCTTCTTCTCATCTCCGAACCCTTCCTTCTTGGAAACAAGAGGTTAGGGATGAAGAAGGAAGGAGAAGATTTCATGGAGCATTTACAGGAGGATTTTCTGCTGGTTATTACAATACAGTGGGATCCAAGGAGGGTTGGGCTCCAAAGACATTCTCATCATCACGGAAGAACAGAACTGAAGTTAGACAGCAAAGTGTTTTGGACTTCTTGGATGAAGATGAAAAAGCAGAAATGGAAGGTCACCTATTGGGGACGTCATCACAGTTTGATACCTTTGGATTTACAGCTACAGAGATTGCCCGCCAACAAGCTGAGAAAGAGCAGAAGCACAGGCCATCAGCCATTCCTGGTCCTGTCCCTGATGAACTAGTTGTTCCTGCTACTGAATCTGTTGGTGTGAAGTTGTTATCAAAAATGGGATGGCGGCATGGTCGATCTATAAAAGACTCACGTGCTAACTCACTTCATGAGGTTCGTAGAGAGGCTAGGAAGGCATTTTTAGCTCTTTCTTCCAATGATAAATCAGCAAGTAGCAGTGGCTCTGGGACCATGAAGGATGGCCTTGATGACCTTATTGAGGAGCCGGCTACTGACCATGTTGAGTTTTCCCAGTGCACACCGGTATATGTGCGGCAACCTAAACAAGACTTGTATGGTCTAGGGTATGATCCATACAAGCATGCTCCGGAATTCAGGGAGATGAAAAGATCACACTTGTTAGAGCATAGAGAGGTTGGCTTCAGAAAACCTTTCTTCTCAACACTAGAACCTTCCAAGTCAAGAAGGATTGCTCCTGGCTTTGGCATTGGAGCATTGGAAGAGCTTGATGTTGAGGATGAGGATATCTATGCCTCTGGATATAACTATGCAGAGACATATGTTCCGGACGATGAAGAGACTTCAAGACTGCTGCTGGAGGATGCTGAAAAGTCAAGTGGCAAAGATTTGGGTTTTATTCCTAGATTCAAAGTTGCATCTAATTCTGAATATCAGTTGGAAAGATTCGATCCTCCAAACATTCCTAATGATTTCATTGCGCGGCACAAGTTTCTTATGCCCATTGATACTATTAACCTGATCAGTGTTCCCTCTCCACCAGAGGTCCCACCTCCTGAGGATAATAATCTTAAAATCATGATTGAGGGAGTTGCAGCTTTGGTGGCTCGTTGTGGTAAATTATTTGAGGACATCTCAAGAGAGAAGAATAAGTCAAATCCACTATTTAATTTTCTCAATGGTGGAATTGGTCATGGCTATTATGCAAGAAAGTTGTGGGAGGAGCAACAAAAGCGTAATGATCACATTAAATGGCGACCAGATGAAAAATTATACTCTACTGTGCAGAAAATGACAGCAGAGAGTCGTGGCAAAATCTTAGGGGAAAAACCTTTGGAAAGAACCTTGAAGGATTCTAGTTCTTCCTTAGCCGCCGGAGATGTCCAACTTCAATCTAATCTTTCAGATACATTCACCAAACCTGAATCATTTAGGGAGCTCCTTGAAGCTGCAAAACCTTTCAAAGATGATCCAGGAAAGCAAGAAAGATTTGAGCAGTTCCTGAAGGACAAATATCAAGGAGGACTCCGCTCTACCGATTCAGGGAAAGCAAATAACTTGTCAGAAGCTTCCCGTGCCCGTGAGAGATTAGATTTTGAGGCTGCTGCTGAGGCAATTGAAAAAGCAAAGTTGGCCAACCAGACCAAACACTCGGCACAGCAGCTAATGGAATTCACTATGGCTACGGGGCTGCAGTTCACTTCTGGTGGAGTTGAGCATGGGAAGGCCAGTTCTGAAGAACCATTGACATCTAGGAAAGTATATCCAAAGCGTGAAGAGTTCCAGTGGCGACCTGCACCTTTACTGTGCAAGCGTTTCAACATCAGCGATCCTTTCATGGGAAAGCCACCGCCTGCTCCAAGGATGAGAAGCAAGTTGGATTCTCTCATTTTCACACCAGATTCTGCAAAAATGAAGAAGACAGAGGAATCAATTTTGTCCATTGATCACTCAGTCATTCCTTTGAAAAATAATGAAGATATGGCCATGGAAATGAACAGCAGGCAACCTGAAGTTGCTGTAGAAGTTGAAAATGTTGAGCGGCCAGTTGACCTTTACAAGGCCATTTTCTCTGATGACTCTGATGACGAAGTAGAGGAATCCGGTATTAGTCAAATGGAAGATCCACAAAAGAAGACTGAAGCTGCTAGTGCAGCCTTTAGCCGCATAGTAGCTGGTGACTTCTTGGAGTCTTTGGGCAAGGAACTTGGCTTAGAGGTTCCTCCTGATTTGCCTTTGCCAGCTAATAAAGCTGGGACCTCAGTGTCACCTAAAGATGGTACCGAAGATACTGGTGGTACTAATGTCGTGCCAAAGGATTTGCCGTCATCTGCTTCATTGTACAATGATGGAGTTTCTGCAACCCGTGAGGTTGAGAAGAGCAAAGGATTGAAGCAGGCTGTTGATAATGAGGCCAGAACAGTAGAAAAACCACCTAAAATTGAAAACATAACTGAAACTTCCAGCTTGCAGAAAGGTCATAGCAATGTTAATGTTGATAGAAAGGATCGAGGGGATAGGAAGGACAGATATGACAACAGCAGTTCATCATCAGAAGATGAACGGAAACGAAAACGCCATAGGAGACACCATCATAGACGCAGTAGTTCAGATGATGATTCCTCTGATGATTCTAGAGATCGACATCGCTCTAGGTCGAGAGACAACAAGCGAAGGTCTTCACGGAAGAAGCATCGAAGGAGAAGGCACTCAAAGTACAAGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_77988.p1 GENE.S_Transcript_77988~~S_Transcript_77988.p1 ORF type:complete len:958 (+),score=273.91,DUF1604|PF07713.9|1.4e-34,DUF1604|PF07713.9|1.6e+04,Surp|PF01805.16|5.5e-09 S_Transcript_77988:176-3049(+)
MDSDEEDFVFVGTPIEREEELTSRKKKALAESSSHLRTLPSWKQEVRDEEGRRRFHGAFTGGFSAGYYNTVGSKEGWAPKTFSSSRKNRTEVRQQSVLDFLDEDEKAEMEGHLLGTSSQFDTFGFTATEIARQQAEKEQKHRPSAIPGPVPDELVVPATESVGVKLLSKMGWRHGRSIKDSRANSLHEVRREARKAFLALSSNDKSASSSGSGTMKDGLDDLIEEPATDHVEFSQCTPVYVRQPKQDLYGLGYDPYKHAPEFREMKRSHLLEHREVGFRKPFFSTLEPSKSRRIAPGFGIGALEELDVEDEDIYASGYNYAETYVPDDEETSRLLLEDAEKSSGKDLGFIPRFKVASNSEYQLERFDPPNIPNDFIARHKFLMPIDTINLISVPSPPEVPPPEDNNLKIMIEGVAALVARCGKLFEDISREKNKSNPLFNFLNGGIGHGYYARKLWEEQQKRNDHIKWRPDEKLYSTVQKMTAESRGKILGEKPLERTLKDSSSSLAAGDVQLQSNLSDTFTKPESFRELLEAAKPFKDDPGKQERFEQFLKDKYQGGLRSTDSGKANNLSEASRARERLDFEAAAEAIEKAKLANQTKHSAQQLMEFTMATGLQFTSGGVEHGKASSEEPLTSRKVYPKREEFQWRPAPLLCKRFNISDPFMGKPPPAPRMRSKLDSLIFTPDSAKMKKTEESILSIDHSVIPLKNNEDMAMEMNSRQPEVAVEVENVERPVDLYKAIFSDDSDDEVEESGISQMEDPQKKTEAASAAFSRIVAGDFLESLGKELGLEVPPDLPLPANKAGTSVSPKDGTEDTGGTNVVPKDLPSSASLYNDGVSATREVEKSKGLKQAVDNEARTVEKPPKIENITETSSLQKGHSNVNVDRKDRGDRKDRYDNSSSSSEDERKRKRHRRHHHRRSSSDDDSSDDSRDRHRSRSRDNKRRSSRKKHRRRRHSKYK*

Click here to download the sequence:
Link to NCBI Protein BLAST