Transcript Information: S_Transcript_78068.p1


Annotated TAIR IDAT1G20696.2
Annotated Gene Namehigh mobility group B3
Annotated Gene Symbol(s)HMGB3, NFD3, NFD03
Annotation TypeHomolog
Chromosome Positionchr1:7179825-7181193 | Forward length=147
E-Value0.0001
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.0670292221499
Replicate 21.8207156430959
Replicate 31.1638619858583
Condition 2: 8 Hour
Replicate 13.6232459276682
Replicate 23.4752386236469
Replicate 33.9320495582004
Condition 3: 24 Hour
Replicate 11.1664743611482
Replicate 21.8703145475626
Replicate 32.5711792840167


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_78068.p1 GENE.S_Transcript_78068~~S_Transcript_78068.p1 ORF type:complete len:206 (+),score=38.73,HMG_box_2|PF09011.6|1.1e+03,HMG_box_2|PF09011.6|0.00091,HMG_box_2|PF09011.6|0.0014 S_Transcript_78068:147-764(+)
ATGGTTGTAACCAGATCAATGTCCAAAAAAGCTAAGGAAAAAATTGATACTAAGGATGTTGAGGAAAAGGTTAAAGTTCGTAAAACGACATTGGATGATGAAGCTTTTTGGATATACATATACGAAATCCATGTGATAGAATATAGGAAGAAGTATTCAACAACAGGATTTCCAATGGAAGCTTATTGTGCTGCACGAACGAAATGGGAATCATTGTCTCGTAAGGAAAAAGCTCCGTTTTTACAAAAGGCCAGGGATAAGAGAGCTGCATCTCATGAGCGTAGCAGAAAACGCAAGTTTCCTGTTGTTGCTAAGGAAAAAATAGAAAACCCAAGCAAGGATGATGACACAGTGTTAGAAACAAAAGTCACCTATGGTAAATTTACATTGGATAAGGAAGCTTTGTGTTTCTACATAAGAACCTCTGTGATGGAATATATGAAGAAGCATCCAAAGAATGGATATCCAACAGAACTTTATTTAGCTGGGCACCGTAAATGGCCTTCCTTGTCTCGTAAGGAAAAAGCTCCGTTTTTACAAAAGGCCAGGGATAAGAGAGCTGCATCTCGTGAGTTTTACAGAAAATGGAAGAACAGGAGAGATCACCGTTTAGCTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_78068.p1 GENE.S_Transcript_78068~~S_Transcript_78068.p1 ORF type:complete len:206 (+),score=38.73,HMG_box_2|PF09011.6|1.1e+03,HMG_box_2|PF09011.6|0.00091,HMG_box_2|PF09011.6|0.0014 S_Transcript_78068:147-764(+)
MVVTRSMSKKAKEKIDTKDVEEKVKVRKTTLDDEAFWIYIYEIHVIEYRKKYSTTGFPMEAYCAARTKWESLSRKEKAPFLQKARDKRAASHERSRKRKFPVVAKEKIENPSKDDDTVLETKVTYGKFTLDKEALCFYIRTSVMEYMKKHPKNGYPTELYLAGHRKWPSLSRKEKAPFLQKARDKRAASREFYRKWKNRRDHRLA*

Click here to download the sequence:
Link to NCBI Protein BLAST