Transcript Information: S_Transcript_78069.p1


Annotated TAIR IDAT1G20696.2
Annotated Gene Namehigh mobility group B3
Annotated Gene Symbol(s)HMGB3, NFD3, NFD03
Annotation TypeHomolog
Chromosome Positionchr1:7179825-7181193 | Forward length=147
E-Value0.0001
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 15.0629612105953
Replicate 22.798207456075
Replicate 32.698936987844
Condition 2: 8 Hour
Replicate 12.1845521788283
Replicate 22.7282742243569
Replicate 33.2233720768508
Condition 3: 24 Hour
Replicate 12.237768552695
Replicate 22.3216587468453
Replicate 32.5837216219875


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_78069.p1 GENE.S_Transcript_78069~~S_Transcript_78069.p1 ORF type:5prime_partial len:205 (+),score=22.37,HMG_box_2|PF09011.6|0.0075,HMG_box_2|PF09011.6|0.0013 S_Transcript_78069:3-617(+)
GTGGCGCGGTATGTTGGGCAATACTTTTGCCGAACCAGTATTTTGGGCAATTTTTTTTATTTTTACGTCAGACATGGAAATCCCTCGGTTTTTTATTTGAATTTTATTAACTACAGATACGAAATCCATGTGATAGAATATAGGAAGAAGTATTCAACAACAGGATTTCCAATGGAAGCTTATTGTGCTGCACGAACGAAATGGGAATCATTGTCTCGTAAGGAAAAAGCTCCGTTTTTACAAAAGGCCAGGGATAAGAGAGCTGCATCTCATGAGCGTAGCAGAAAACGCAAGTTTCCTGTTGTTGCTAAGGAAAAAATAGAAAACCCAAGCAAGGATGATGACACAGTGTTAGAAACAAAAGTCACCTATGGTAAATTTACATTGGATAAGGAAGCTTTGTGTTTCTACATAAGAACCTCTGTGATGGAATATATGAAGAAGCATCCAAAGAATGGATATCCAACAGAACTTTATTTAGCTGGGCACCGTAAATGGCCTTCCTTGTCTCGTAAGGAAAAAGCTCCGTTTTTACAAAAGGCCAGGGATAAGAGAGCTGCATCTCGTGAGTTTTACAGAAAATGGAAGAACAGGAGAGATCACCGTTTAGCTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_78069.p1 GENE.S_Transcript_78069~~S_Transcript_78069.p1 ORF type:5prime_partial len:205 (+),score=22.37,HMG_box_2|PF09011.6|0.0075,HMG_box_2|PF09011.6|0.0013 S_Transcript_78069:3-617(+)
VARYVGQYFCRTSILGNFFYFYVRHGNPSVFYLNFINYRYEIHVIEYRKKYSTTGFPMEAYCAARTKWESLSRKEKAPFLQKARDKRAASHERSRKRKFPVVAKEKIENPSKDDDTVLETKVTYGKFTLDKEALCFYIRTSVMEYMKKHPKNGYPTELYLAGHRKWPSLSRKEKAPFLQKARDKRAASREFYRKWKNRRDHRLA*

Click here to download the sequence:
Link to NCBI Protein BLAST