Transcript Information: S_Transcript_78120.p1


Annotated TAIR IDAT2G21090.1
Annotated Gene NamePentatricopeptide repeat (PPR-like) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr2:9045695-9047488 | Reverse length=597
E-Value1.5E-251
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.0308848686676
Replicate 25.0125442712426
Replicate 34.0313726034721
Condition 2: 8 Hour
Replicate 17.7446770342772
Replicate 28.5097737510836
Replicate 38.7684812006722
Condition 3: 24 Hour
Replicate 15.7150125483138
Replicate 24.173886125076
Replicate 34.4713779237986


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_78120.p1 GENE.S_Transcript_78120~~S_Transcript_78120.p1 ORF type:complete len:581 (+),score=88.15,PPR_2|PF13041.2|0.83,PPR_2|PF13041.2|0.0063,PPR_2|PF13041.2|0.0012,PPR_2|PF13041.2|5.5e-05,PPR_2|PF13041.2|0.042,PPR_2|PF13041.2|8.2e-05,PPR_2|PF13041.2|2.8e-08,PPR_2|PF13041.2|6.8,PPR_2|PF13041.2|1.2e-12,PPR_2|PF13041.2|0.019,PPR_2|PF13041.2|4.6e+03,PPR|PF01535.16|1.2e+03,PPR|PF01535.16|0.073,PPR|PF01535.16|4.3e-05,PPR|PF01535.16|1.3e-05,PPR|PF01535.16|0.0023,PPR|PF01535.16|7.3e-07,PPR|PF01535.16|4.1e-06,PPR|PF01535.16|2.2e+03,PPR|PF01535.16|13,PPR|PF01535.16|8.8e-06,PPR|PF01535.16|0.0026,PPR|PF01535.16|18,PPR|PF01535.16|1.6e+04,PPR|PF01535.16|1.6e+02,PPR_1|PF12854.3|1.8e+03,PPR_1|PF12854.3|5.9,PPR_1|PF12854.3|0.019,PPR_1|PF12854.3|0.0075,PPR_1|PF12854.3|0.11,PPR_1|PF12854.3|0.0011,PPR_1|PF12854.3|0.0041,PPR_1|PF12854.3|2e+03,PPR_1|PF12854.3|1.9e+02,PPR_1|PF12854.3|0.01,PPR_1|PF12854.3|0.014,PPR_1|PF12854.3|0.9,PPR_3|PF13812.2|1.4,PPR_3|PF13812.2|0.38,PPR_3|PF13812.2|15,PPR_3|PF13812.2|5.8e+03,PPR_3|PF13812.2|0.075,PPR_3|PF13812.2|0.0065,PPR_3|PF13812.2|9.8,PPR_3|PF13812.2|5.7e+02,PPR_3|PF13812.2|43,PPR_3|PF13812.2|0.0074,PPR_3|PF13812.2|0.4,PPR_3|PF13812.2|81,PPR_3|PF13812.2|1.9e+02 S_Transcript_78120:244-1986(+)
ATGCGATCTTTTTCACTTCCAAATCAAGCCCTTTCTCATTTCCAAGCCAAACCCAGAAACCCCAGAAAAAACCCACCTTGTATAGTTCAAAGGGTAGTCGATCTCTGCTACAAAGGTCAGCTAAGAGAAGCAGTTGATTCACTTCACATATTATCTCAAAAGGGCCTTCGTTTGGACTCTCAAACGGTTGCTTTTTTATTGGATGAGTGTGCAAAGACCAGGTCGCTTAAAGAGGGCAAATGGGTCCATCTTCATTTGAAGCTTACTGGTATGAAACACCCCAATACTTTCGTATCAAATCATTTAATGCGTATGTACTTTGAATGCGGTGATCACGTTAACGCACGTAAGGTGTTTGATAAAATGTCTGTGAGAAACTTGTACAGTTGGAATAATGCCCTTTCTGGGTATGCTAAGTTAGGCATGCTTGGGGCTGCTAGAAGGTTGTTTGATAAAATGGGTGAAAGGGATGTGGTTTCATGGAATACTATGGTGATTGGGTATGCACAGAGTGGAGATTATAGTGAGGCTTTAAACTTTTATAGGGAGTTTAGAACGGCTTCTGTTGGATATAATGCATTTAGTTTTGCTGGTGTTTTGACTGTTGCGTCGAAATTGAGGGATCCAGTATTGACTAGGCAGGTGCACTGTCAAGTGTTGATTGCTGGGTTTCTTAATAATGTGGTCCTATCGAGCTCAATTGTAGATGCTTATGCTAAATGCTGTGAGATGGACAGTGCAAGGAAGTTGTTTGAGGAGATGTGGGTCAGGGATATTCCAGCTTGGACTGCATTGATTTCAGGTTATGCCAAATGGGGAGATATGAAATCGGCACAAGAATTGTTTGATGTGATGCCTGAGAAAAACTTAGTGTCATGGACTGCTATGGTTTCTGGTTATGCTCGCAACAATTTAGGGCATTTTGCACTTGAAATGTTTAGGAAAATGATGATACTTGGCATTAGACCCAGTCAGTTCACTTTCAGTAGCTGCCTTTGTGCTTGCAGTAGCTTAGCTTCATTAAAGCATGGTAAACAGATCCATGCTTATATGCTACGAACTGGTTTCAGGCCCAATACCATGGTCATGAGCTCTCTCATTGATATGTATTCAAAATGCGGAAGTTTAAAGCTCAGTCAGCTGGTTTTTCACTTGCTAGGTAATAAGCACGATGTTATGATGTGGAACCCCATGATAACTGCCTTAGCTCAGCATGGTTACGGTGAAGAGGCAATCAGAGTATTCAATGACATGATTCTTTTTGGGTTAAAACCAAATAGGGTGACCTTTGTTATCCTTCTCAGTGCATGTAGTCATTCAGGTCTTGTAGATCAGGGACTATCATTTTTCAAATCTATGTCAGAAGATCATGGCATTCCTCCTGATGAAGAGCATTATGCATGCCTGGTTGATCTTTTAGGTAGAGCTGGATGTATTGATGAATTGATGAAACAGCTAGAAATGATGCCCTGTAAAAACGATGATAGGATATGGAATGCCCTGGTTGGTGTTTGTCAAATTCATGAGAATGCTAAGTTAGGGAAGCAGGCTGCAGAACGTCTTCTTGAACTGGAACCACAATCTTCTGCACCCTATTTACTACTTTCAAGCATATATGCTGCATCTGGCAACTGGGAGAATGTGGAAAGAATGAGACATATCATGGATCAGAAATCTGTGAGAAAGTCGCAAGCGAGTAGCTGGGTTGAAACCAACCACAAGGCTCATGCTTTAAGTGCATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_78120.p1 GENE.S_Transcript_78120~~S_Transcript_78120.p1 ORF type:complete len:581 (+),score=88.15,PPR_2|PF13041.2|0.83,PPR_2|PF13041.2|0.0063,PPR_2|PF13041.2|0.0012,PPR_2|PF13041.2|5.5e-05,PPR_2|PF13041.2|0.042,PPR_2|PF13041.2|8.2e-05,PPR_2|PF13041.2|2.8e-08,PPR_2|PF13041.2|6.8,PPR_2|PF13041.2|1.2e-12,PPR_2|PF13041.2|0.019,PPR_2|PF13041.2|4.6e+03,PPR|PF01535.16|1.2e+03,PPR|PF01535.16|0.073,PPR|PF01535.16|4.3e-05,PPR|PF01535.16|1.3e-05,PPR|PF01535.16|0.0023,PPR|PF01535.16|7.3e-07,PPR|PF01535.16|4.1e-06,PPR|PF01535.16|2.2e+03,PPR|PF01535.16|13,PPR|PF01535.16|8.8e-06,PPR|PF01535.16|0.0026,PPR|PF01535.16|18,PPR|PF01535.16|1.6e+04,PPR|PF01535.16|1.6e+02,PPR_1|PF12854.3|1.8e+03,PPR_1|PF12854.3|5.9,PPR_1|PF12854.3|0.019,PPR_1|PF12854.3|0.0075,PPR_1|PF12854.3|0.11,PPR_1|PF12854.3|0.0011,PPR_1|PF12854.3|0.0041,PPR_1|PF12854.3|2e+03,PPR_1|PF12854.3|1.9e+02,PPR_1|PF12854.3|0.01,PPR_1|PF12854.3|0.014,PPR_1|PF12854.3|0.9,PPR_3|PF13812.2|1.4,PPR_3|PF13812.2|0.38,PPR_3|PF13812.2|15,PPR_3|PF13812.2|5.8e+03,PPR_3|PF13812.2|0.075,PPR_3|PF13812.2|0.0065,PPR_3|PF13812.2|9.8,PPR_3|PF13812.2|5.7e+02,PPR_3|PF13812.2|43,PPR_3|PF13812.2|0.0074,PPR_3|PF13812.2|0.4,PPR_3|PF13812.2|81,PPR_3|PF13812.2|1.9e+02 S_Transcript_78120:244-1986(+)
MRSFSLPNQALSHFQAKPRNPRKNPPCIVQRVVDLCYKGQLREAVDSLHILSQKGLRLDSQTVAFLLDECAKTRSLKEGKWVHLHLKLTGMKHPNTFVSNHLMRMYFECGDHVNARKVFDKMSVRNLYSWNNALSGYAKLGMLGAARRLFDKMGERDVVSWNTMVIGYAQSGDYSEALNFYREFRTASVGYNAFSFAGVLTVASKLRDPVLTRQVHCQVLIAGFLNNVVLSSSIVDAYAKCCEMDSARKLFEEMWVRDIPAWTALISGYAKWGDMKSAQELFDVMPEKNLVSWTAMVSGYARNNLGHFALEMFRKMMILGIRPSQFTFSSCLCACSSLASLKHGKQIHAYMLRTGFRPNTMVMSSLIDMYSKCGSLKLSQLVFHLLGNKHDVMMWNPMITALAQHGYGEEAIRVFNDMILFGLKPNRVTFVILLSACSHSGLVDQGLSFFKSMSEDHGIPPDEEHYACLVDLLGRAGCIDELMKQLEMMPCKNDDRIWNALVGVCQIHENAKLGKQAAERLLELEPQSSAPYLLLSSIYAASGNWENVERMRHIMDQKSVRKSQASSWVETNHKAHALSA*

Click here to download the sequence:
Link to NCBI Protein BLAST