Transcript Information: S_Transcript_78279.p1


Annotated TAIR IDAT3G59390.2
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2054 (InterPro:IPR019352); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:21946160-21948166 | Forward length=273
E-Value4.4E-45
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 19.6774549946111
Replicate 24.9028421238922
Replicate 37.2653202753578
Condition 2: 8 Hour
Replicate 117.232638640107
Replicate 215.592500567082
Replicate 315.287123029835
Condition 3: 24 Hour
Replicate 19.267526329343
Replicate 210.072805145043
Replicate 316.050391894165


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_78279.p1 GENE.S_Transcript_78279~~S_Transcript_78279.p1 ORF type:3prime_partial len:99 (+),score=1.66,DUF2054|PF10218.5|1.1e-19 S_Transcript_78279:201-494(+)
ATGCCGCCGATCTTGAACCTGGTGTTATTCTATCTCCTCTTCTTTCTATTCCCGTCAACGGCTTTAGCAATCAGGAAGGATGTACGCATTCGTGTTCATTCGTGCAGGAATACAGTTCAAGGAAGATATTTGTTAGCTGATGACAGCGGTTATATCTGTGATGCTCTGTCAGTGGATCCTGAGTCGCGATGTTGCCCTCGGAGAGGAGATCAATACTCTTGTCATGGATGCAACCTCATTTCACAATGCTGCAACTCTTACGAGTTTTGTGTTTCGTGTTGCCTGAATCCATCA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_78279.p1 GENE.S_Transcript_78279~~S_Transcript_78279.p1 ORF type:3prime_partial len:99 (+),score=1.66,DUF2054|PF10218.5|1.1e-19 S_Transcript_78279:201-494(+)
MPPILNLVLFYLLFFLFPSTALAIRKDVRIRVHSCRNTVQGRYLLADDSGYICDALSVDPESRCCPRRGDQYSCHGCNLISQCCNSYEFCVSCCLNPS

Click here to download the sequence:
Link to NCBI Protein BLAST