Transcript Information: S_Transcript_78281.p1


Annotated TAIR IDAT3G59390.2
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2054 (InterPro:IPR019352); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:21946160-21948166 | Forward length=273
E-Value2.9E-139
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 18.1174791412327
Replicate 26.9851302846186
Replicate 36.5510877208156
Condition 2: 8 Hour
Replicate 111.280225766206
Replicate 211.833757774682
Replicate 310.863675227249
Condition 3: 24 Hour
Replicate 110.458554258045
Replicate 210.763122872165
Replicate 38.9591817964119


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_78281.p1 GENE.S_Transcript_78281~~S_Transcript_78281.p1 ORF type:5prime_partial len:259 (-),score=43.56,DUF2054|PF10218.5|6.2e-33,DUF2054|PF10218.5|6.4e+03,Glyco_transf_18|PF15024.2|8.1e-08 S_Transcript_78281:273-1049(-)
TATCTCCTCTTCATTCAATTCCCGTCAACGGCTCTAGCAATCAGGAAGGATGTACGACTTCGTGTTCATTCGTGCAGGAATACAGTTCAAGGAAGATATTTGTTAGCCGATGACAGTGGTTATATCTGTGATGCTCTGTCAGTGGATCCTGAGTCACGATGTTGTCCTCGGAGAGGAGATCAATACTCTTGTCATGGATGCAACCTCATTTCACAATGCTGCAACTCTTACGAGTTTTGTGTTTCGTGTTGCCTGAATCCATCACTGACTCTTGAGGAGCTGGCACTGCAGGTCAAGATAGCCAAGGCAGAAACTGCAGGTACTTACAGTACTGTTTTTGATTACTGTGCTGGAAGGTGCCGTCACAACTCTGAGAGTGTGGTTCATGAAAACGCTTATCTCAGTGATTCCCACCACTGCTTTTCTTTGCCGTCAAATTCATCAGGGTCCTCTGATACTTTGTTGGAATCGAGGTTGGCTGGAATCAGTGTCGTTGTTGGAAGGCAAGGTGAATCATGTGATTCTGTTTGTAAGTTGAGTGGGCAATCATGTGTTCCTAGCCGGCTTTTGGTTCTCAATCAATGTGAAATTATGCAGAAATATTTGAACTGCAGAGGAGGGTGTGTAGCTAGCATTGGAGCAGATCAACCTGCTGAAGTTGTTGATGATGCACCAAAGCATTTGTACCCTGGAGCATGCTTATATACAAAAACCCAGTCAATGTTCTCATGTGATGGTGCACATCAGCATACAAGAAGGCTTTGCCCCTGTGCTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_78281.p1 GENE.S_Transcript_78281~~S_Transcript_78281.p1 ORF type:5prime_partial len:259 (-),score=43.56,DUF2054|PF10218.5|6.2e-33,DUF2054|PF10218.5|6.4e+03,Glyco_transf_18|PF15024.2|8.1e-08 S_Transcript_78281:273-1049(-)
YLLFIQFPSTALAIRKDVRLRVHSCRNTVQGRYLLADDSGYICDALSVDPESRCCPRRGDQYSCHGCNLISQCCNSYEFCVSCCLNPSLTLEELALQVKIAKAETAGTYSTVFDYCAGRCRHNSESVVHENAYLSDSHHCFSLPSNSSGSSDTLLESRLAGISVVVGRQGESCDSVCKLSGQSCVPSRLLVLNQCEIMQKYLNCRGGCVASIGADQPAEVVDDAPKHLYPGACLYTKTQSMFSCDGAHQHTRRLCPCA*

Click here to download the sequence:
Link to NCBI Protein BLAST