Transcript Information: S_Transcript_7839.p1


Annotated TAIR IDAT3G55530.1
Annotated Gene NameRING/U-box superfamily protein
Annotated Gene Symbol(s)SDIR1
Annotation TypeOrtholog
Chromosome Positionchr3:20595300-20597188 | Reverse length=273
E-Value6E-72
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.3219397050829
Replicate 25.1825344598189
Replicate 35.322400346274
Condition 2: 8 Hour
Replicate 16.0111838477825
Replicate 23.7536658791488
Replicate 32.5750688381857
Condition 3: 24 Hour
Replicate 13.3720289951924
Replicate 23.8026529490516
Replicate 33.0469583845107


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_7839.p1 GENE.S_Transcript_7839~~S_Transcript_7839.p1 ORF type:complete len:149 (+),score=6.73 S_Transcript_7839:384-830(+)
ATGAGCTTTGTATTTCGAGGCACGCGAGCTGATATTGAGAATGCACTTCCTAGTATCATTCCCGAACGGCGCATGAGGATCCATGCTGGGCGGCCTGTGAATACCAACTCGCTTGCCTTCCTCGTTACTGTGCTTTTGCTCTTCATGATACTAAATTCGCATCAAATATCACCGAATTTTTTGCTCTGGCTAGTCTTCGGCTTCTTTTTGATGGCCACCAGTTTACGTATGTATGCAACATGTCAACAACTTCAAGCTCAGGCACAAGCACATGCTGTAGCCGCCACTGGCCTACTTCGTCACACTGAGCTCCGGTTGCATGTGTCTCCATCAATTGCATTTGCATCTAGAGGACGCCTCCAGGGCCTCAGGCTGCAGCTTGCGCTGCTAGACCGGGAATTCGATGATCTAGGTAAGGCACAACAACTTAGCCCTTGTCCTTTTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_7839.p1 GENE.S_Transcript_7839~~S_Transcript_7839.p1 ORF type:complete len:149 (+),score=6.73 S_Transcript_7839:384-830(+)
MSFVFRGTRADIENALPSIIPERRMRIHAGRPVNTNSLAFLVTVLLLFMILNSHQISPNFLLWLVFGFFLMATSLRMYATCQQLQAQAQAHAVAATGLLRHTELRLHVSPSIAFASRGRLQGLRLQLALLDREFDDLGKAQQLSPCPF*

Click here to download the sequence:
Link to NCBI Protein BLAST