Transcript Information: S_Transcript_7842.p1


Annotated TAIR IDAT3G55530.1
Annotated Gene NameRING/U-box superfamily protein
Annotated Gene Symbol(s)SDIR1
Annotation TypeOrtholog
Chromosome Positionchr3:20595300-20597188 | Reverse length=273
E-Value5.5E-93
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.8042712701817
Replicate 23.1162132143382
Replicate 31.875532483078
Condition 2: 8 Hour
Replicate 12.2891661922346
Replicate 21.7695247511648
Replicate 32.8902844210144
Condition 3: 24 Hour
Replicate 11.6044264710606
Replicate 22.8169709303935
Replicate 32.9924459463697


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_7842.p1 GENE.S_Transcript_7842~~S_Transcript_7842.p1 ORF type:3prime_partial len:177 (+),score=18.01 S_Transcript_7842:394-921(+)
ATGAGCTTTGTATTTCGAGGCACGCGAGCTGATATTGAGAATGCACTTCCTAGTATCATTCCCGAACGGCGCATGAGGATCCATGCTGGGCGGCCTGTGAATACCAACTCGCTTGCCTTCCTCGTTACTGTGCTTTTGCTCTTCATGATACTAAATTCGCATCAAATATCACCGAATTTTTTGCTCTGGCTAGTCTTCGGCTTCTTTTTGATGGCCACCAGTTTACGTATGTATGCAACATGTCAACAACTTCAAGCTCAGGCACAAGCACATGCTGTAGCCGCCACTGGCCTACTTCGCCACACTGAGCTCCGGTTGCATATGCCTCCATCAATTGCATTTGCATCTAGAGGACGCCTCCAGGGCCTCAGGCTGCAGCTTGCGCTGCTAGACCGGGAATTCGATGATCTAGATTATGAAACTTTAAGAGCACTGGATGCTGACAATGTTCCTACAGTTCCCTCAATGAGTGATGAGGAGATAAATGCTCTACCAGTGCACAAGTATAAGGTTAGCAGTTCCCAAAGT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_7842.p1 GENE.S_Transcript_7842~~S_Transcript_7842.p1 ORF type:3prime_partial len:177 (+),score=18.01 S_Transcript_7842:394-921(+)
MSFVFRGTRADIENALPSIIPERRMRIHAGRPVNTNSLAFLVTVLLLFMILNSHQISPNFLLWLVFGFFLMATSLRMYATCQQLQAQAQAHAVAATGLLRHTELRLHMPPSIAFASRGRLQGLRLQLALLDREFDDLDYETLRALDADNVPTVPSMSDEEINALPVHKYKVSSSQS

Click here to download the sequence:
Link to NCBI Protein BLAST