Transcript Information: S_Transcript_78444.p1


Annotated TAIR IDAT5G51700.1
Annotated Gene Nameprotein binding;zinc ion binding
Annotated Gene Symbol(s)PBS2, ATRAR1, RPR2, RAR1
Annotation TypeOrtholog
Chromosome Positionchr5:21001373-21003143 | Reverse length=226
E-Value5.1E-90
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 125.289702831221
Replicate 223.891197531894
Replicate 325.065818102573
Condition 2: 8 Hour
Replicate 131.929175557696
Replicate 229.293525566935
Replicate 329.559545573759
Condition 3: 24 Hour
Replicate 125.948342267833
Replicate 227.171531005897
Replicate 325.918785963269


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_78444.p1 GENE.S_Transcript_78444~~S_Transcript_78444.p1 ORF type:complete len:181 (-),score=27.93,CHORD|PF04968.8|1.4e-07,CHORD|PF04968.8|3.2e-24 S_Transcript_78444:191-733(-)
ATGAAGGAGTGGACCTGTGGCAAGAAAAGAAGCCACGATTTCAGCTTGTTCTTGGAAATTCCTGGATGCAAGACTGGTAAGCACACAACTGAAAAGCCTGTTCTAACAAGTGCCAACAGAAGTAGGAATCCTGCTCCTGCTCCTAAGCCAGTCTCTGGTCCTACAACAGGTGTATCATCAAAAGAAACTTGCTCTAGGTGTCGGCAGGGATTTTTTTGCTCTGACCATGGTTCACATCCAAATCCCAAACCAGTAGATGCAAAAGCAGCTACCTCTACAGAAGCCACTGTGAGTGCTTCTGCTCCACCAAAAAAGATAGTCGGCATAAATGAACCTCAAATTTGTAAGAACAAGGGTTGCGGCCAAACTTTTAAAGAGATTGATAATCACGATACTGCATGCAACTATCACCCTGGGCCTGCTATATTCCATGACCGGATGAGAGGGTGGAAATGCTGTGACGTTCACGTGAAGGAATTTGATGAGTTCATGAGCATCCCACCCTGCATGAAGGGATGGCACAACGCAGATCCTACTTCCTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_78444.p1 GENE.S_Transcript_78444~~S_Transcript_78444.p1 ORF type:complete len:181 (-),score=27.93,CHORD|PF04968.8|1.4e-07,CHORD|PF04968.8|3.2e-24 S_Transcript_78444:191-733(-)
MKEWTCGKKRSHDFSLFLEIPGCKTGKHTTEKPVLTSANRSRNPAPAPKPVSGPTTGVSSKETCSRCRQGFFCSDHGSHPNPKPVDAKAATSTEATVSASAPPKKIVGINEPQICKNKGCGQTFKEIDNHDTACNYHPGPAIFHDRMRGWKCCDVHVKEFDEFMSIPPCMKGWHNADPTS*

Click here to download the sequence:
Link to NCBI Protein BLAST