Transcript Information: S_Transcript_78447.p1


Annotated TAIR IDAT5G05800.1
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G11290.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:1743234-1744751 | Reverse length=449
E-Value6E-09
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.0090237435139
Replicate 20.52281491842452
Replicate 31.1362823179469
Condition 2: 8 Hour
Replicate 11.4149548077719
Replicate 21.5904157800754
Replicate 31.2122756931743
Condition 3: 24 Hour
Replicate 11.345893295629
Replicate 21.2889371512615
Replicate 30.83675028832139


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_78447.p1 GENE.S_Transcript_78447~~S_Transcript_78447.p1 ORF type:complete len:211 (-),score=46.77 S_Transcript_78447:180-812(-)
ATGCAGACAGATCCTAATATTTTAGCATTTCGCGATGGTGGGATTAAAAATTTGAAGGAGCTTGAAGTGATGTATTCGAAGATCATAGCTAGTAGTGAGCTAGCTTGGAACCAATATGATGATGAAGGCGAGAGTGAACCCTTAGAAGACATAGAATCTACTTTGGGAAATGAGCAGCTTGAAAATGAAGAAGAGGAAGAAGAAATCGAGAATATGAACCATGATCCCAACTTTGAAGTACAAGAGAAGAAAGTTAGAAATGACGATAATAGAAAGAAAGCACCGGTTTCTTCAAGTGGAGCTAAAGGAAAAATTAAAAAAACTGGAAAGAAGTCTAAAATTGCTACTGCACCACTTATGCAAGCTGAATTGAATCGCATAGCTTCATCAATAGAGACTTACTCTCAATATAGTACTAGAATGATGGCAAGTAGGGTGGATCCTCCTGAATCTAGTATAGCAGAATGCTTAAAGTTGCTAGGCTCCATCCCGGAAGCAAAGTTTGGTAGTGAGTTATATATGCTAGGTACTCGACTATTTTTGAAAAGAGAGTATAGGTTGATGTTTGTTAACTTGCCTAGTGAAGTTAGAGTGGCATGGCTTGAGCAAGAGCTTAACAGAGAGAAAATATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_78447.p1 GENE.S_Transcript_78447~~S_Transcript_78447.p1 ORF type:complete len:211 (-),score=46.77 S_Transcript_78447:180-812(-)
MQTDPNILAFRDGGIKNLKELEVMYSKIIASSELAWNQYDDEGESEPLEDIESTLGNEQLENEEEEEEIENMNHDPNFEVQEKKVRNDDNRKKAPVSSSGAKGKIKKTGKKSKIATAPLMQAELNRIASSIETYSQYSTRMMASRVDPPESSIAECLKLLGSIPEAKFGSELYMLGTRLFLKREYRLMFVNLPSEVRVAWLEQELNREKI*

Click here to download the sequence:
Link to NCBI Protein BLAST