Transcript Information: S_Transcript_7845.p1


Annotated TAIR IDAT3G55530.1
Annotated Gene NameRING/U-box superfamily protein
Annotated Gene Symbol(s)SDIR1
Annotation TypeOrtholog
Chromosome Positionchr3:20595300-20597188 | Reverse length=273
E-Value4E-57
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.2346794930304
Replicate 21.0105094453824
Replicate 30.98548971439087
Condition 2: 8 Hour
Replicate 12.1162601078071
Replicate 22.2201071169194
Replicate 31.7898803332427
Condition 3: 24 Hour
Replicate 12.8348322087031
Replicate 22.2490805381108
Replicate 31.7328122110385


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_7845.p1 GENE.S_Transcript_7845~~S_Transcript_7845.p1 ORF type:internal len:131 (-),score=26.70,zf-RING_2|PF13639.2|4.7e-12,zf-RING_11|PF17123.1|6.5e-09,zf-RING_11|PF17123.1|2.5e+03,zf-C3HC4|PF00097.21|2.1e-07,zf-rbx1|PF12678.3|1.5e-06,zf-C3HC4_2|PF13923.2|9.4e-07 S_Transcript_7845:1-390(-)
CGGGAATTCGATGATCTAGATTATGAAACTTTAAGAGCACTGGATGCTGACAATGTTCCTGCAGTTCCCTCAATGAGTGACGAGGAGATAAATGCTCTACCAGTGCACAAGTATAAGGTTAGCAGTTCCCAAAGTGATGCAGGAGCAGTACAGCAGGCATCATCGTCATCAACATCTCCTCAGAAGCAGCAGGATATTTCCATCAACGTAGGAAGCTCTAAGGGGACCTCCGAAGATGAACTAACTTGTAGTGTTTGCTTGGAGCAAGTAGCTGTGGGCGAACTCATTCGTAGCTTGCCATGTTTACACAAGTACCATGCTAACTGCATTGATCCGTGGCTGAGACAGCAGGGAACATGCCCTGTGTGTAAATTCAAGGTCGGAGCTGGC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_7845.p1 GENE.S_Transcript_7845~~S_Transcript_7845.p1 ORF type:internal len:131 (-),score=26.70,zf-RING_2|PF13639.2|4.7e-12,zf-RING_11|PF17123.1|6.5e-09,zf-RING_11|PF17123.1|2.5e+03,zf-C3HC4|PF00097.21|2.1e-07,zf-rbx1|PF12678.3|1.5e-06,zf-C3HC4_2|PF13923.2|9.4e-07 S_Transcript_7845:1-390(-)
REFDDLDYETLRALDADNVPAVPSMSDEEINALPVHKYKVSSSQSDAGAVQQASSSSTSPQKQQDISINVGSSKGTSEDELTCSVCLEQVAVGELIRSLPCLHKYHANCIDPWLRQQGTCPVCKFKVGAG

Click here to download the sequence:
Link to NCBI Protein BLAST