Transcript Information: S_Transcript_78466.p1


Annotated TAIR IDAT5G11680.1
Annotated Gene NameFUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cytosol, plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: WW-domain-binding protein (InterPro:IPR018826); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:3759463-3760634 | Forward length=207
E-Value6.7E-114
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 155.465710495104
Replicate 249.368222178201
Replicate 347.202448293176
Condition 2: 8 Hour
Replicate 164.926312104143
Replicate 268.776821808268
Replicate 366.269070771922
Condition 3: 24 Hour
Replicate 148.339915447008
Replicate 246.786185283846
Replicate 344.950178147732


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_78466.p1 GENE.S_Transcript_78466~~S_Transcript_78466.p1 ORF type:complete len:202 (+),score=18.70 S_Transcript_78466:153-758(+)
ATGGCGTTGAACCCTCAGCTATTCCCGAATGGAATGCCGGTTCCATTCTACAGCGAATTGTTCGTCTTAGCTAGAGATGGCGTCGAATTTGAGGTTGACAAGATTCCCGGGAGTGGAAAAGTCAAAGCCAAGGGGACAATCTACTTGTCTAATATTCGAATGGTGTTTGTGGCAAGTAAGCCTACGGGAAACTTTTTCGCATTCGATATGCCCCTGCTATATGTCCACGAGGAGAAATTCAATCAGCCCATATTTCATTGTAACAATATTTCAGGGCTTGTAGAGCCGGTCATTCCTGAAACTGAGAACAGAGCTCTGTATTCGACTCACTCATTTAAGATTCTGTTCAAGGAGGGTGGCTGTGGTACCTTTATTCCATTGTTCTTCAACCTAATCAAGTCTGTGCGGCAGTATAATCAACATGCTGCTCCTGTCCCAGAGCCTCGTGTCGATCCGTTATGTGCAGCCCAAACCCCTGTGGATGATATGATGAGACATGCATACGTTGATCCAAATGATCCGACGAAGATCTATTTGCAGCAGCCTACACCAGATTCAAATCTGAGGCGGCGTACGTACCATTCACAGACAGGAGACAGCATATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_78466.p1 GENE.S_Transcript_78466~~S_Transcript_78466.p1 ORF type:complete len:202 (+),score=18.70 S_Transcript_78466:153-758(+)
MALNPQLFPNGMPVPFYSELFVLARDGVEFEVDKIPGSGKVKAKGTIYLSNIRMVFVASKPTGNFFAFDMPLLYVHEEKFNQPIFHCNNISGLVEPVIPETENRALYSTHSFKILFKEGGCGTFIPLFFNLIKSVRQYNQHAAPVPEPRVDPLCAAQTPVDDMMRHAYVDPNDPTKIYLQQPTPDSNLRRRTYHSQTGDSI*

Click here to download the sequence:
Link to NCBI Protein BLAST