Transcript Information: S_Transcript_78496.p1


Annotated TAIR IDAT1G48200.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 30 Blast hits to 30 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 30; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:17797070-17797852 | Reverse length=118
E-Value1E-21
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 110.278124614966
Replicate 26.8470726212977
Replicate 310.81125908349
Condition 2: 8 Hour
Replicate 18.8242994415723
Replicate 28.9487394558906
Replicate 37.9383156597862
Condition 3: 24 Hour
Replicate 17.9846815517344
Replicate 25.0016687616767
Replicate 310.262762895875


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_78496.p1 GENE.S_Transcript_78496~~S_Transcript_78496.p1 ORF type:5prime_partial len:145 (+),score=23.86 S_Transcript_78496:3-437(+)
TCCCCTTCTTCTCACTTGTTCCAGTACTGCACTGCTGTTCTGTGTCAGCAATTCATACTGAAGAAGAAGCGAGAAAGTTCAAAGATGGAAGTTGCAGGGAGAGCAATGAACCTGATAAACAGGTTAATCAACAGCAACGTCTTCATCGACATATGTTTAGTAGGTTCCTTTGCTGCTCTAGGTTTAAGATCCATGTACCAAGAGAAACTCATCGAAACCCTAGAATCCGAAAAGCAAACCCTAACTCAAACCAATAAAACCATGAAGAAGACCCTTTGGGATTGGAAACAGCAGCTCTACGCTGAAGCCTCTTCTCCTGATACCGCCATTGTTCCCCTCTCTTGCCTCAAGGCCATCTATGGCGAAGTTGTTTCCGTTCCTTCCGCTGAAAATGTGAAGAAAGAGGGCAAAAGATCAGCTAAAATCGTTATCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_78496.p1 GENE.S_Transcript_78496~~S_Transcript_78496.p1 ORF type:5prime_partial len:145 (+),score=23.86 S_Transcript_78496:3-437(+)
SPSSHLFQYCTAVLCQQFILKKKRESSKMEVAGRAMNLINRLINSNVFIDICLVGSFAALGLRSMYQEKLIETLESEKQTLTQTNKTMKKTLWDWKQQLYAEASSPDTAIVPLSCLKAIYGEVVSVPSAENVKKEGKRSAKIVI*

Click here to download the sequence:
Link to NCBI Protein BLAST