Transcript Information: S_Transcript_78497.p1


Annotated TAIR IDAT1G48200.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 30 Blast hits to 30 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 30; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:17797070-17797852 | Reverse length=118
E-Value3.4E-28
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 110.828738433625
Replicate 29.4337445004546
Replicate 37.8858595667809
Condition 2: 8 Hour
Replicate 115.589595680111
Replicate 213.577397795144
Replicate 312.789508562989
Condition 3: 24 Hour
Replicate 17.3820640761318
Replicate 29.5344310769461
Replicate 37.4796407546206


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_78497.p1 GENE.S_Transcript_78497~~S_Transcript_78497.p1 ORF type:5prime_partial len:145 (+),score=21.54 S_Transcript_78497:3-437(+)
TCCCCTTCTTCTCACTTGTTCCAGTACTGCACTGCTGTTCTGTGTCAGCAATACATACTGAGGAAGAAGCGAGAAAGTTCAAGAATGGAAGTTGCAGGGAGAGCAATGAACCTGATAAACAGGTTAATCAACAGCAACGTCTTCATCGACATATGTTTAGTAGGTTCCTTTGCTGCTCTAGGTTTAAGATCCATGTACCAAGAGAAACTCATCGAAGCCCTAGAATCCGAAAAGCAAATCCTAACTCAAACCAATAAAGCCATGAAGAAGACCCTTTGGGATTGGAAACAGCAGCTCTACGCTGAAGCCTCTTCTCCTGATACCGCCATTGTTCCCCTCTCTTGCCTCAAGGCCATCTATGGCGAAGTCGTTTCCGTTCCTTCCGCTGAAAATGTGGAGAAAGAGGGCAAAACATCAACTAAAATCGTTATCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_78497.p1 GENE.S_Transcript_78497~~S_Transcript_78497.p1 ORF type:5prime_partial len:145 (+),score=21.54 S_Transcript_78497:3-437(+)
SPSSHLFQYCTAVLCQQYILRKKRESSRMEVAGRAMNLINRLINSNVFIDICLVGSFAALGLRSMYQEKLIEALESEKQILTQTNKAMKKTLWDWKQQLYAEASSPDTAIVPLSCLKAIYGEVVSVPSAENVEKEGKTSTKIVI*

Click here to download the sequence:
Link to NCBI Protein BLAST