Transcript Information: S_Transcript_78498.p1


Annotated TAIR IDAT1G48200.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 30 Blast hits to 30 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 30; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:17797070-17797852 | Reverse length=118
E-Value2E-21
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.178842206389
Replicate 21.0321772892405
Replicate 32.3727496715743
Condition 2: 8 Hour
Replicate 14.9883953958206
Replicate 26.0181581136107
Replicate 36.7313202963099
Condition 3: 24 Hour
Replicate 11.788469993382
Replicate 22.5182012862608
Replicate 31.3274760213219


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_78498.p1 GENE.S_Transcript_78498~~S_Transcript_78498.p1 ORF type:complete len:171 (+),score=22.15 S_Transcript_78498:88-600(+)
ATGAGGGACAAGAGCAATACAATTACACAAGTTTTATGTTGTGGGACACAAGAATATCACTTATCCCTTGAAAACCAACTCTCTATTCCCCTTCTTCTGATCTTCTCCCTTGCTCCAGTATTGCATAGCTGTTCAGTGTCAGAGCAGCGAGCAAGTTCAAAGATGGAAGTTGCAGGGAGAGCAATGAACCTGATAAACAGGTTAATCAACAGCAACGTCTTCATCGACATATGTTTAGTAGGTTCCTTTGCTGCTCTAGGTTTAAGATCCATGTACCAAGAGAAACTCATCGAAACCCTAGAATCCGAAAAGCAAACCCTAACTCAAACCAATAAAACCATGAAGAAGACCCTTTGGGATTGGAAACAGCAGCTCTACGCTGAAGCCTCTTCTCCTGATACCGCCATTGTTCCCCTCTCTTGCCTCAAGGCCATCTATGGCGAAGTTGTTTCCGTTCCTTCCGCTGAAAATGTGAAGAAAGAGGGCAAAAGATCAGCTAAAATCGTTATCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_78498.p1 GENE.S_Transcript_78498~~S_Transcript_78498.p1 ORF type:complete len:171 (+),score=22.15 S_Transcript_78498:88-600(+)
MRDKSNTITQVLCCGTQEYHLSLENQLSIPLLLIFSLAPVLHSCSVSEQRASSKMEVAGRAMNLINRLINSNVFIDICLVGSFAALGLRSMYQEKLIETLESEKQTLTQTNKTMKKTLWDWKQQLYAEASSPDTAIVPLSCLKAIYGEVVSVPSAENVKKEGKRSAKIVI*

Click here to download the sequence:
Link to NCBI Protein BLAST