Transcript Information: S_Transcript_78507.p1


Annotated TAIR IDAT5G54390.1
Annotated Gene NameHAL2-like
Annotated Gene Symbol(s)AHL, ATAHL, HL
Annotation TypeHomolog
Chromosome Positionchr5:22086133-22087586 | Forward length=373
E-Value5E-120
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 125.320537599035
Replicate 227.322792365929
Replicate 325.241713845104
Condition 2: 8 Hour
Replicate 123.161351072913
Replicate 219.556847817509
Replicate 320.468860282929
Condition 3: 24 Hour
Replicate 129.271179423379
Replicate 225.665640924208
Replicate 327.059411878337


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_78507.p1 GENE.S_Transcript_78507~~S_Transcript_78507.p1 ORF type:complete len:453 (+),score=80.64,Inositol_P|PF00459.21|3.7e-52 S_Transcript_78507:430-1788(+)
ATGCCTATATATTGTTCAACCTTTTCTTCACAACAACCCTTTTCTGTAAGACTTATAGAAAAATCCCACTTCATATATAAGCCTATAGAAAAGGGTTCCTTCTTCTTTCCTTGTAAAACCAGCCATAGCATATCTATAAGCAACTGCAAAAGGTCTTCAATCATGGAGGGTAATAGTAATACTAGTGATCAATTAAGGGCTGTGACTTTAGAGTCAAAAGAAGATAAGTATTCTAAAGAATTGGATGTTGCTGTTAAAGCTGTACAAATGGCTTGTTCTTTGTGTCAAAGGGTACAAGAGCGTTTGATTTCTAAGCCCAATTCTCTTGTTCACTCTAAGGATGATAATTCCCTTGTGACTATTGCAGATTGGAGTGTCCAAGCTACTGTCAGATGGGTACTATCTGAATCTTTTGGCGATAAGAATGTGTCTATTGTAGCAGAAGAAGATGTTGAAACCCTCGCAAAGTCTGAAGCAACTGGCCTTTTGGAATCTGTAGTACAAACTGTCAACAATTGTCTAGCAGAAGCACCTCAATTTGGACTTAGGGGTCCAAGAATGCCTCTAGGTAAATCTGAGGTTGTTGAGGCCATTAGGAAGTGCAATTCAATTGGTGGTTCTAGAGGTAGATTTTGGGTACTAGATCCAGTTGATGGCACACTAGGCTTTGTACGTGGGGATCAATATGCCGTCGCTTTAGCACTGGTGGAGGATGGAGAAGTTGTGGTAGGAGTTCTTGGTTGCCCTAATTACCCACTGAAAAAGGAATGGCTATTTTATCATCATCGATACTATAGGATTATATCCAAGCTGACCCCATCAACATCTGATTCCTGGAATAAAGGTTTTGTGTTATATGCTAGAAAAGATTGTGGTAAAGCTTGGATGCAGCCATTATTCCAGCAACATAAGATGCTGGTCAGTCCAAACTCTCCCAAACCCGTTTGCGTGTCCCCCATTGAAGATCCAGCACTGGCTACATTCTGTGAGCCTGTCGAAAGGGCAAATTCGAGCCATTCTTTCACAGCTGGACTTGCTCACAGCGTCGGTGTTAGGAAGCAACCTTTGCGTGTTTACAGCATGGTCAAGTATGCTGCTGTAGCACGAGGTGATGCAGAGATCTTCATGAAGTTTGCAAGGTCGGGCTACAAAGAGAAGATATGGGATCATGCAGCTGGTAGCATTATTATTCAAGAGGCTGGTGGTGTGGTGACTGATGCCGGGGGCCATCCTTTGGACTTTTCCAAGGGTATATATCTGGAAGGTCTTGACCGTGGTATCATTGCCTGTGCTGGGTCTCGGTTACATCAGAGGATTATAAGAGCAGTAGACGCCAGCTGGGATTCCTCCTGCCTCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_78507.p1 GENE.S_Transcript_78507~~S_Transcript_78507.p1 ORF type:complete len:453 (+),score=80.64,Inositol_P|PF00459.21|3.7e-52 S_Transcript_78507:430-1788(+)
MPIYCSTFSSQQPFSVRLIEKSHFIYKPIEKGSFFFPCKTSHSISISNCKRSSIMEGNSNTSDQLRAVTLESKEDKYSKELDVAVKAVQMACSLCQRVQERLISKPNSLVHSKDDNSLVTIADWSVQATVRWVLSESFGDKNVSIVAEEDVETLAKSEATGLLESVVQTVNNCLAEAPQFGLRGPRMPLGKSEVVEAIRKCNSIGGSRGRFWVLDPVDGTLGFVRGDQYAVALALVEDGEVVVGVLGCPNYPLKKEWLFYHHRYYRIISKLTPSTSDSWNKGFVLYARKDCGKAWMQPLFQQHKMLVSPNSPKPVCVSPIEDPALATFCEPVERANSSHSFTAGLAHSVGVRKQPLRVYSMVKYAAVARGDAEIFMKFARSGYKEKIWDHAAGSIIIQEAGGVVTDAGGHPLDFSKGIYLEGLDRGIIACAGSRLHQRIIRAVDASWDSSCL*

Click here to download the sequence:
Link to NCBI Protein BLAST