Transcript Information: S_Transcript_78542.p1


Annotated TAIR IDAT5G57560.1
Annotated Gene NameXyloglucan endotransglucosylase/hydrolase family protein
Annotated Gene Symbol(s)TCH4, XTH22
Annotation TypeHomolog
Chromosome Positionchr5:23307296-23308235 | Reverse length=284
E-Value7E-06
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20
Replicate 30.30483861295207
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20.1873042279037
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_78542.p1 GENE.S_Transcript_78542~~S_Transcript_78542.p1 ORF type:complete len:121 (-),score=36.43 S_Transcript_78542:196-558(-)
ATGAAGGTGGCAACTTCTATCACAGAAGTTGAAACAGTGAAGGCAAGTGAGAATGAGGCACTCAAGAGGTTTGAGGCTGCTCAAAAGGAGATTGAAGCTACAAAGGCAGCCATAGAGGAGGCCTTAAAGAAGGCTGAGGTTGCCAAAAACACTGTGGAGGACGCATTAAGACAAATGGGACAGCTGCTTCTTTCACTGATTCCTTTAAGAACTTCAAGGCCAATGTCTGTGTATGGTCTGCTAGCAAAACTTCCTCTTCTTACAATCCCGAGTCTTTATCTTCCTCCAAGTTTAGATGGCTCTATCAAGAATTTGATTCCTCCAACCAAGCCACTTTACAATTTGTTCAACAAAAGTGCATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_78542.p1 GENE.S_Transcript_78542~~S_Transcript_78542.p1 ORF type:complete len:121 (-),score=36.43 S_Transcript_78542:196-558(-)
MKVATSITEVETVKASENEALKRFEAAQKEIEATKAAIEEALKKAEVAKNTVEDALRQMGQLLLSLIPLRTSRPMSVYGLLAKLPLLTIPSLYLPPSLDGSIKNLIPPTKPLYNLFNKSA*

Click here to download the sequence:
Link to NCBI Protein BLAST