Transcript Information: S_Transcript_78561.p1


Annotated TAIR IDAT3G18930.1
Annotated Gene NameRING/U-box superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:6524110-6525345 | Reverse length=411
E-Value3.3E-20
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 18.2123646502993
Replicate 28.4975013144953
Replicate 37.7878839146527
Condition 2: 8 Hour
Replicate 12.4739431922428
Replicate 21.6610189245273
Replicate 31.4837016894419
Condition 3: 24 Hour
Replicate 116.016202280807
Replicate 212.988309650482
Replicate 314.33735702843


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_78561.p1 GENE.S_Transcript_78561~~S_Transcript_78561.p1 ORF type:complete len:431 (+),score=77.24,zf-RING_2|PF13639.2|3.7e-15,zf-RING_11|PF17123.1|6e-12,zf-rbx1|PF12678.3|3.2e-10,zf-C3HC4|PF00097.21|1.6e-07,zf-C3HC4_2|PF13923.2|1.9e-06,zf-ANAPC11|PF12861.3|1.2e-05 S_Transcript_78561:441-1733(+)
ATGAAGAAAAGAACCAACCTTAAACCTCACAAATCAATGGCGGAACCCTCGGTTCAAAAAGACGACGATTTCCCTTGCATTTTAAGAGGATGTGACAAACCAGGCTCACCATGCGTCTACACGTGCGTTTGGTCGGACCCATTTCTCTCTCCCCCACCTCCACCGCCGCCACCACCACCGCCAACACCAACCGCCGAGAGCCACGTGGCACCCTTCTTAATTGCTACGGTTTGTTTTCTTGGCATCTCCTTTCTTCTTCTAACTACTTGCACCATCATTTTAAGGTACCGGTTCAGCCGCCTCCGTCGTAGAAATTCACCGGTTCGACCGGACCAAACCCCGGTCCAAGACGACGACTTTTCTGATGGGTCAGTTGTTGACCACCCTATTTGGCATATCGCCACTGTTGGTCTCCAACAATCGGCGATTGATTCTATTACTGCTTTTAAGTATTACAAGATCGATGGGTTTTTAAGTGATGGGAATAATAATGATTGTTCTGTTTGTTTGACTGAGTTTGAAGATGGTGATGATCTTAGACTCTTGCCAAAGTGTAGCCATGCTTTTCATCTTTCTTGTATTGATACTTGGTTGAGGTCTCACAAGAACTGCCCTTTATGTCGTTCTCCTGTTGTTAATGAACCTGAACCTTCTGGGGGTTTCCCTCAAGGTGTTAATTTTAGTGCTATACAGTTGAGTTCTGGTAATTTGGATGGTGGGCAACAAGTCGAAATCGAAAATTCTGGCCATAATGATGGTGGGTTGAATTCTGTTGTTTCTTTGGATGAGGAAAATAATGGTGATCAGAGTAGTAGTACTAGTAATCAATTGAGAGAAAGAAGGGATAATTTAACTTTGCCTATTGAGGGTATAAGGATAGCTGAGATATTGAAGAAGAATCGCGAGCTTCGGATTTTAAGTGATTTGGGGGAAAATTATCGGTTTCGTGGGGAGGATGATGATGGTGTTGAGCCTATTAGAAGGTCATTTTCGTTCAATTCTGTGGCTGCCTCGGTAATTTATGGTGCTATGAGTAATGTAAGCACAATGGGGAGTAATGAAGGATGTTCTAGCAACACTAGTGGTGGTGGTGTTGGACAAGAAAAGAAGATCAATGTTGTTGAGAGGGTGTCTAAACGAGGTTCGAGTATGTCTGGTTTGTTGATCAAGAGTTCTTCCATTGGTCGTTCCCTGCAAAAGGCTCCTGTTTCTATGAAGAGATCGCTTTCGTCTAGTAGCAAGTTCTTTTCATTCCGCAAAACAAAAAGCCAAGCTTCCATCCTTCCTTTGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_78561.p1 GENE.S_Transcript_78561~~S_Transcript_78561.p1 ORF type:complete len:431 (+),score=77.24,zf-RING_2|PF13639.2|3.7e-15,zf-RING_11|PF17123.1|6e-12,zf-rbx1|PF12678.3|3.2e-10,zf-C3HC4|PF00097.21|1.6e-07,zf-C3HC4_2|PF13923.2|1.9e-06,zf-ANAPC11|PF12861.3|1.2e-05 S_Transcript_78561:441-1733(+)
MKKRTNLKPHKSMAEPSVQKDDDFPCILRGCDKPGSPCVYTCVWSDPFLSPPPPPPPPPPPTPTAESHVAPFLIATVCFLGISFLLLTTCTIILRYRFSRLRRRNSPVRPDQTPVQDDDFSDGSVVDHPIWHIATVGLQQSAIDSITAFKYYKIDGFLSDGNNNDCSVCLTEFEDGDDLRLLPKCSHAFHLSCIDTWLRSHKNCPLCRSPVVNEPEPSGGFPQGVNFSAIQLSSGNLDGGQQVEIENSGHNDGGLNSVVSLDEENNGDQSSSTSNQLRERRDNLTLPIEGIRIAEILKKNRELRILSDLGENYRFRGEDDDGVEPIRRSFSFNSVAASVIYGAMSNVSTMGSNEGCSSNTSGGGVGQEKKINVVERVSKRGSSMSGLLIKSSSIGRSLQKAPVSMKRSLSSSSKFFSFRKTKSQASILPL*

Click here to download the sequence:
Link to NCBI Protein BLAST