Transcript Information: S_Transcript_78586.p1


Annotated TAIR IDAT4G30480.2
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)TPR1, AtTPR1
Annotation TypeOrtholog
Chromosome Positionchr4:14897500-14898937 | Forward length=277
E-Value2.7E-97
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 164.958615918129
Replicate 264.369572400778
Replicate 366.102996715414
Condition 2: 8 Hour
Replicate 193.78585634094
Replicate 293.73724394208
Replicate 387.555417044117
Condition 3: 24 Hour
Replicate 169.058018776717
Replicate 267.260344033031
Replicate 363.281114994915


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_78586.p1 GENE.S_Transcript_78586~~S_Transcript_78586.p1 ORF type:complete len:279 (+),score=68.86,TPR_11|PF13414.2|1.8e-14,TPR_11|PF13414.2|8.6e-13,TPR_1|PF00515.24|3.6e+03,TPR_1|PF00515.24|0.00032,TPR_1|PF00515.24|0.00057,TPR_1|PF00515.24|2.9e-08,TPR_2|PF07719.13|6.9e-05,TPR_2|PF07719.13|0.11,TPR_2|PF07719.13|5.5e-08,TPR_12|PF13424.2|2.6e-07,TPR_12|PF13424.2|9e-08,TPR_8|PF13181.2|5.2,TPR_8|PF13181.2|1.5,TPR_8|PF13181.2|1.9e-07,ANAPC3|PF12895.3|0.00048,ANAPC3|PF12895.3|1.9e-06,TPR_19|PF14559.2|0.0081,TPR_19|PF14559.2|7.1e-05,TPR_7|PF13176.2|2.9e+03,TPR_7|PF13176.2|0.11,TPR_7|PF13176.2|12,TPR_7|PF13176.2|0.049,TPR_16|PF13432.2|0.0039,TPR_16|PF13432.2|0.005,TPR_16|PF13432.2|0.19,TPR_14|PF13428.2|1.6,TPR_14|PF13428.2|2.6e+02,TPR_14|PF13428.2|0.00089,TPR_17|PF13431.2|7.1e+02,TPR_17|PF13431.2|2.3e+03,TPR_17|PF13431.2|0.00016,TPR_17|PF13431.2|60,Fis1_TPR_C|PF14853.2|9.7,Fis1_TPR_C|PF14853.2|2.7,Fis1_TPR_C|PF14853.2|0.007,TPR_9|PF13371.2|4.5,TPR_9|PF13371.2|8.9e-05,DUF3856|PF12968.3|2e-05,TPR_6|PF13174.2|33,TPR_6|PF13174.2|3.6e+02,TPR_6|PF13174.2|0.02 S_Transcript_78586:196-1032(+)
ATGGTGATGATCGAAGATGAAGAACCACAACAAAAAGTGATCTCCAGCTGCAAAGAGGCAGAAGAAACGGTCTCGACGACGAGGAACTCCACCGATGAACCGTCAGTTCCAGATTCGGGAAACGAAATGATCGAAACGCCGTCCGTGAGTAGGGACGTTTCGGAAGGCTTCGAAACGGCTAGTGAAGGAAGTGAGAATGATGATGATGAAGGACGGCAAGAAGAACAAGTTTCGCCGGAGGAGGAGTCGAGAAAGATTGATTCTTACGAAGATGCTCTCGATGATGATCAATTGAAGCAGAAAGCTTTAGCACAAGCAAATGATGCAAAGGTGGAAGGGAATGCATTGTTTAAAGATGGCCAGTATGAGGATGCAATATTAAAGTATGAATCTGCTCTGCAATTAGCACCAGAAATGCCATCATCAGTTGAACTACGTTCCATATGTCATGCGAACTGTGCCGTATGCCACCTAAAATTGGGGAAGTATGATGAAACAGTCAAGGAATCCACAAAAGCATTGGAACTAAATCCATCATATGTTAAAGCTCTTGTTAGGAGAGGAGAGGCTTATGAAAAGCTTGAAAAATATGAAGAAGCTATTGCTGATATGAAGAAAATTTTGGAGTTGGATCCTTCAAATGATCAGGCCAGGAGAAATATTGTTCGCTTGGAGCCATTGGCCCGGGAGAAGATGGAAAAAATGAAGGAAGAAATGATTGGGAAGCTAAAAGAGATGGGCAACTCGTTGCTTGGTCGCTTTGGGATGAGCATTGACAATTTCAAATCTGTTCAAGATCCTAACACTGGTTCTTACTCTATTCAATTCCAACGTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_78586.p1 GENE.S_Transcript_78586~~S_Transcript_78586.p1 ORF type:complete len:279 (+),score=68.86,TPR_11|PF13414.2|1.8e-14,TPR_11|PF13414.2|8.6e-13,TPR_1|PF00515.24|3.6e+03,TPR_1|PF00515.24|0.00032,TPR_1|PF00515.24|0.00057,TPR_1|PF00515.24|2.9e-08,TPR_2|PF07719.13|6.9e-05,TPR_2|PF07719.13|0.11,TPR_2|PF07719.13|5.5e-08,TPR_12|PF13424.2|2.6e-07,TPR_12|PF13424.2|9e-08,TPR_8|PF13181.2|5.2,TPR_8|PF13181.2|1.5,TPR_8|PF13181.2|1.9e-07,ANAPC3|PF12895.3|0.00048,ANAPC3|PF12895.3|1.9e-06,TPR_19|PF14559.2|0.0081,TPR_19|PF14559.2|7.1e-05,TPR_7|PF13176.2|2.9e+03,TPR_7|PF13176.2|0.11,TPR_7|PF13176.2|12,TPR_7|PF13176.2|0.049,TPR_16|PF13432.2|0.0039,TPR_16|PF13432.2|0.005,TPR_16|PF13432.2|0.19,TPR_14|PF13428.2|1.6,TPR_14|PF13428.2|2.6e+02,TPR_14|PF13428.2|0.00089,TPR_17|PF13431.2|7.1e+02,TPR_17|PF13431.2|2.3e+03,TPR_17|PF13431.2|0.00016,TPR_17|PF13431.2|60,Fis1_TPR_C|PF14853.2|9.7,Fis1_TPR_C|PF14853.2|2.7,Fis1_TPR_C|PF14853.2|0.007,TPR_9|PF13371.2|4.5,TPR_9|PF13371.2|8.9e-05,DUF3856|PF12968.3|2e-05,TPR_6|PF13174.2|33,TPR_6|PF13174.2|3.6e+02,TPR_6|PF13174.2|0.02 S_Transcript_78586:196-1032(+)
MVMIEDEEPQQKVISSCKEAEETVSTTRNSTDEPSVPDSGNEMIETPSVSRDVSEGFETASEGSENDDDEGRQEEQVSPEEESRKIDSYEDALDDDQLKQKALAQANDAKVEGNALFKDGQYEDAILKYESALQLAPEMPSSVELRSICHANCAVCHLKLGKYDETVKESTKALELNPSYVKALVRRGEAYEKLEKYEEAIADMKKILELDPSNDQARRNIVRLEPLAREKMEKMKEEMIGKLKEMGNSLLGRFGMSIDNFKSVQDPNTGSYSIQFQR*

Click here to download the sequence:
Link to NCBI Protein BLAST