Transcript Information: S_Transcript_78609.p1


Annotated TAIR IDAT1G54520.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1517 (InterPro:IPR010903); Has 276 Blast hits to 275 proteins in 83 species: Archae - 0; Bacteria - 108; Metazoa - 6; Fungi - 0; Plants - 113; Viruses - 0; Other Eukaryotes - 49 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:20363565-20365874 | Forward length=391
E-Value1.7E-122
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 165.370824462606
Replicate 265.575513407058
Replicate 372.673162424664
Condition 2: 8 Hour
Replicate 145.189517576782
Replicate 247.229458239423
Replicate 340.855374576214
Condition 3: 24 Hour
Replicate 186.512673506401
Replicate 272.398286979999
Replicate 376.967270426723


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_78609.p1 GENE.S_Transcript_78609~~S_Transcript_78609.p1 ORF type:5prime_partial len:252 (-),score=64.15,DUF1517|PF07466.7|7.1e-88 S_Transcript_78609:334-1089(-)
GGTATGGGTAGGGGTTTGTCTTATTCAGTGCCATTTTATGCACCTTCACCATTTAGTGGTGGTGGGTTCTTTATTGGGCCGGCTTATGGGTTTGGAGCAGTGTCCAATTTGGTGTGGATCATGATGGGTTTGGCTGCTTTTGGTGTGGTTTCTGGGTTGATCATGGATAAGCCTCAAGATGGGGTCTTGACTGCTACTGACAAAACTAGTGTCATTAAACTTCAGGTTGGACTATTGGGCATGGCACGGTCACTTCAAAGTGATCTCAATCGGATTGCTGAAAGTGCTGATGCATCTACCCCAGAGGGTCTAAGCTATGTCTTGACAGAAACAATACTGGCCTTGCTTCGGCACCCTGATTACTGTATCTCAGCTTATGCATCGGTTGACATTAAAAGGAGCATTGAGGATGGAGAGAAGAAGTTCAACCAACTATCTATTGAGGAACGAGGGAAATTTGATGAAGAAACATTGGTCAATGTGAACAACATAAAGAGACAGAACACAAGAAGCATGAGAGCCACTGGATTTAGCAACGAGTATATAGTGATTACCATCTTGGTCGCTGCTGAAGGAGTACACAAATTGCCTGCTATAAACGGAAGCCTGGACTTGAAAGAAGCCTTACAGAAGCTTGCGTCTATCCCTTCGAGTAAAACCATGGCTGTTGAGGTGCTTTGGACTCCTCAGAATGAAAATGATACATTATCAGAGAGAGAGCTACTTGAAGACTACCCCCTTTTGAAGCCTCTCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_78609.p1 GENE.S_Transcript_78609~~S_Transcript_78609.p1 ORF type:5prime_partial len:252 (-),score=64.15,DUF1517|PF07466.7|7.1e-88 S_Transcript_78609:334-1089(-)
GMGRGLSYSVPFYAPSPFSGGGFFIGPAYGFGAVSNLVWIMMGLAAFGVVSGLIMDKPQDGVLTATDKTSVIKLQVGLLGMARSLQSDLNRIAESADASTPEGLSYVLTETILALLRHPDYCISAYASVDIKRSIEDGEKKFNQLSIEERGKFDEETLVNVNNIKRQNTRSMRATGFSNEYIVITILVAAEGVHKLPAINGSLDLKEALQKLASIPSSKTMAVEVLWTPQNENDTLSERELLEDYPLLKPL*

Click here to download the sequence:
Link to NCBI Protein BLAST