Transcript Information: S_Transcript_78632.p1


Annotated TAIR IDAT2G47580.1
Annotated Gene Namespliceosomal protein U1A
Annotated Gene Symbol(s)U1A
Annotation TypeOrtholog
Chromosome Positionchr2:19517229-19518686 | Forward length=250
E-Value1.5E-125
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 128.685325101854
Replicate 221.79152575148
Replicate 321.23938048972
Condition 2: 8 Hour
Replicate 125.345750786756
Replicate 222.463536543988
Replicate 323.237768290676
Condition 3: 24 Hour
Replicate 118.890452526702
Replicate 219.319970524099
Replicate 321.914235302806


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_78632.p1 GENE.S_Transcript_78632~~S_Transcript_78632.p1 ORF type:complete len:244 (+),score=54.10,RRM_1|PF00076.18|4.1e-11,RRM_1|PF00076.18|1.8e-12,RRM_5|PF13893.2|6.3e-12,RRM_5|PF13893.2|1.6,RRM_6|PF14259.2|0.00037,RRM_6|PF14259.2|0.019 S_Transcript_78632:211-942(+)
ATGGCGGAGGTGCCTAATCCTGGCAGTGATATTCCTCCTAATCAGACTATTTACATCAACAACCTCAACGAAAAGATTAAGCTTGACGAGCTGAAGAAGTCGATAATGGCGGTATTTTCGCAATTCGGGAAGATAATAGAAGTGTTAGCATTCAAGACGTTGAAACACAAAGGCCAAGCTTGGGTTGTCTTTGATGACGTTTCTTCTGCTACCAATGCTCTTCGTCAAATGCAAGGCTTTCCTTTCTATGACAAGCCTATGAGAATACAATATGCAAAGACCAAGTCAGATGTAATTGCAAAAGCTGATGGTACTTTTGTTCCACGAGAAAAACGAAAGAAGCATGAAGAGAGAGGTAAGAAGCGGAAAGAGCAACAAGATCCAAATCTAGCAGCAGCAGGCTTGAATTATCCTGGAGCATATGGCGTAGCTCCTCCTCTTTCACAAATACCATATATGGGTGGTGCAAAGCCAGTTGTTCCTGAGGCTCCGGCTGCTCCAAATAACATACTTTTTGTTCAGAATCTTCCTCATGAGACCACTCCATTGATGCTGCAAGTGCTTTTCAGACAATACCCAGGCTTTAAGGAGGTTCGTATGATCGATGCGAAGCCAGGTATTGCTTTTGTAGAGTATGAAAATGAAATGCAATCAACAGTTGCAATGCATGCACTCCAGAATTTCAAGATTGTGGGACAGAATGCCATGGTTATAACATATGCGAAGAAATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_78632.p1 GENE.S_Transcript_78632~~S_Transcript_78632.p1 ORF type:complete len:244 (+),score=54.10,RRM_1|PF00076.18|4.1e-11,RRM_1|PF00076.18|1.8e-12,RRM_5|PF13893.2|6.3e-12,RRM_5|PF13893.2|1.6,RRM_6|PF14259.2|0.00037,RRM_6|PF14259.2|0.019 S_Transcript_78632:211-942(+)
MAEVPNPGSDIPPNQTIYINNLNEKIKLDELKKSIMAVFSQFGKIIEVLAFKTLKHKGQAWVVFDDVSSATNALRQMQGFPFYDKPMRIQYAKTKSDVIAKADGTFVPREKRKKHEERGKKRKEQQDPNLAAAGLNYPGAYGVAPPLSQIPYMGGAKPVVPEAPAAPNNILFVQNLPHETTPLMLQVLFRQYPGFKEVRMIDAKPGIAFVEYENEMQSTVAMHALQNFKIVGQNAMVITYAKK*

Click here to download the sequence:
Link to NCBI Protein BLAST