Transcript Information: S_Transcript_78648.p2


Annotated TAIR IDAT4G15096.1
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G40955.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:8620596-8622635 | Forward length=679
E-Value0.0004
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.52182355363099
Replicate 20.70298103982278
Replicate 30.99446125940983
Condition 2: 8 Hour
Replicate 11.7771158597611
Replicate 21.5901559082159
Replicate 31.7240759092264
Condition 3: 24 Hour
Replicate 11.5527000520275
Replicate 20.49993702006649
Replicate 30.49454989029639


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_78648.p2 GENE.S_Transcript_78648~~S_Transcript_78648.p2 ORF type:complete len:408 (+),score=84.64,RVP_2|PF08284.7|1.6e-08,Asp_protease_2|PF13650.2|8.6e-08,gag-asp_proteas|PF13975.2|1.9e-06 S_Transcript_78648:798-2021(+)
ATGAACCTACCCTCAAGACCCCTACTACTAACTAGAAAACCAACAGACCCATATTACTACCAACCCACACCACCACAAGAAAACCCCCCAAACACTACCTGCAGCACCAAAAATCAATCTACCCCACCTTTACTACCTAACCCACACAATAGACCTTCCTATAGACAACTTTCCCCTGCTGAGATTGAGGAGAAGAAAGCTAAGGGGCTATGTTTTATCTGCAATGAACCCTTTACACCAGGTCACCACCTCAAACACAGAAGAGCCCAGTTGTATGTTCTGGATGAGATTGAGGAGGAGGAGGAGGAGATTGTTGAAGGAAATGATACCCAGGAAGTAGGGGAGAGTAGTAAGGAGGCTGATAAGGATCTGGGCAAGGCACCCTTGATATCTTTAAATGCCCTCACTGGAAGTGATGCTTGCCAAACACTGAGAGTGACAGCCTATCACAACAAGAAATCTCTGCATATATTGATTGATACTGGGAGCACACACAACTTTTTGGATGAGGGGATGGCCAAAAGGTTGGGCTGTAAGTTGAACCCCATGGACAAACCTCTGACCATATCAATAGCTGATGGGATCAGGTTGATTGCATCTCAAGTGTGCAAGGGGTTCTCATGGCAGCTTCACAACACAACATTCTCTGTAGATCTGATTGTCATTCCTCTAGGGGGATGTGATATGGTTTTGGGGGTACAATGGCTCAAAACTCTTGGCAAAGTCACCTTTGACTTTGATAAACTCACTATGGAGTTTCCTTGGGAGGGGAAATCCCATGTTATTAGGGGGTCCCCCTATCAATATGTGAAAATGGTGAATCAAAAGAAAATGGGAAAAATTATCAACCAAACACCTCAACTGGCTATGATTCAGGTCCAGCAAGGCTCTGGAATCTATGAGGGCATCCAATACTCTTGTTTTAGCATTAATGTGCCAAAAGAGGTGAAGGAAGTGCCAGCAGAAGTAAAGGAGCTCCTGCAACAGTTTCTGAGTGTCTTTCAGGAACCTCAAGAACTGCCCCCTAGTAGACCTGGGTTTGATCACAAAATACCTCTTTTGGAGGGCTCCAACCCCATGAACCTGAGACCCTACAGATACCCTGGTATGCAGAAGGATGAGATTGAGAGGATTGTTGCTGAAATGTTGAGCAAGGGGTTTTGCATCTCCAATAGTTTTAGTCAAAAAGAAGGATGGATCATGGAGGTTATGTGTGGATTATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_78648.p2 GENE.S_Transcript_78648~~S_Transcript_78648.p2 ORF type:complete len:408 (+),score=84.64,RVP_2|PF08284.7|1.6e-08,Asp_protease_2|PF13650.2|8.6e-08,gag-asp_proteas|PF13975.2|1.9e-06 S_Transcript_78648:798-2021(+)
MNLPSRPLLLTRKPTDPYYYQPTPPQENPPNTTCSTKNQSTPPLLPNPHNRPSYRQLSPAEIEEKKAKGLCFICNEPFTPGHHLKHRRAQLYVLDEIEEEEEEIVEGNDTQEVGESSKEADKDLGKAPLISLNALTGSDACQTLRVTAYHNKKSLHILIDTGSTHNFLDEGMAKRLGCKLNPMDKPLTISIADGIRLIASQVCKGFSWQLHNTTFSVDLIVIPLGGCDMVLGVQWLKTLGKVTFDFDKLTMEFPWEGKSHVIRGSPYQYVKMVNQKKMGKIINQTPQLAMIQVQQGSGIYEGIQYSCFSINVPKEVKEVPAEVKELLQQFLSVFQEPQELPPSRPGFDHKIPLLEGSNPMNLRPYRYPGMQKDEIERIVAEMLSKGFCISNSFSQKEGWIMEVMCGL*

Click here to download the sequence:
Link to NCBI Protein BLAST