Transcript Information: S_Transcript_78659.p1


Annotated TAIR IDAT1G05910.1
Annotated Gene Namecell division cycle protein 48-related / CDC48-related
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:1790796-1796503 | Forward length=1210
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 17.378283996292
Replicate 27.0360498749126
Replicate 36.7978033641476
Condition 2: 8 Hour
Replicate 19.4152965262342
Replicate 29.0168588668129
Replicate 38.0446828701492
Condition 3: 24 Hour
Replicate 17.3341395693581
Replicate 26.6829187981537
Replicate 36.305511101279


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_78659.p1 GENE.S_Transcript_78659~~S_Transcript_78659.p1 ORF type:complete len:1248 (+),score=305.93,AAA|PF00004.25|2.4e-39,AAA|PF00004.25|0.32,AAA|PF00004.25|1e+03,Bromodomain|PF00439.21|2.2e-14,IstB_IS21|PF01695.13|1.7e-07 S_Transcript_78659:269-4012(+)
ATGCATCCCAAACGATCGGGACATGAAAATGAGAATGGAGCAGGAACCACTTCACTCAACAATGACGACAACAACAATGTCCCTCAGGTTCGTACCAGTGACCGGATTCGAAGGCGGCCGTCGTCGTATTCTCGAGGAATGTTTTACTACTCCTCCTCTGCAGTAGCCTCATTTCGACAGAAGCGAAAAAAGGCCAAAACCAGAACGGCCGCCTCACAGATTGCCAAGATGCTCAAGCCCGGCGCCCGGCCTGGCGGTCGGCCTGTTGGCCGGCCCGGAAGACGGTCTCGGCTATACGGAACTGGTGGGAGTAAGAGTAACAACACTGAGTTGGATATGACCAACCTTCGGCGCTCTACCAGACAGAGGAGGGTGTCCGTTAACCTGGGAGACTATACAGATAGTTCCGGATCAGATGAGGATTTAATGAAACCTAGACGATATCGGACGAGGAATCGGGTTGAAAACAGTGCTGATCGGGATGAGTTATCAACTCCTAAATGTAGAAAAGTAATTGAGACTAGATCTACACCTCGACGTGAAGGATTGCGTCCTCGTCGCTCCAAAACAGATGGAAGAAGTTTAGGAATGTCATATGATGATGAAGAAGGTAGTTCAGAAGAAAAAGATGACCAAGATGAAATGGAAAATGTAAATGAGGATGAAGATAATGATGATGAAGGTGAGGGTGATGATGAAGGTGAGGCTGAAGGGGATGGAGAAGGTGAAGAGGAGGGCGAGGGTGAGGATGAAAGAGAAGAAGACGGGGATGATGAAGAGGGTGAGGAAGAGCAAGATGGGAAGAGGCGATATGATCTTCGCAACCGTGCAGATGTGCGTAGGCTGTCTATGGAGCAAGGTAAGCAAAGAGCAAGATCTCCACGGAGAGTTTTGCATCATGGGATGGGGACAAAGGTCAATAGAGATGTGAGGAAGGGTGGCTCAAGGGTCCATAAACGTCATCGTTTTGCAAGGATTGAAGATTCTGACGACTCCCTCCTTGTAGATGAATTGGAACAAGGCCCTGCCATTCCTTGGGCTCGAAGTGGTAGCAGATCAGGGCCACCTTGGCTTTTGGGTGGATTGGACATGCATGGGGCAACATCATGGGGATTGAATGTTGCTGCATCTGGATGGGGTCACCAGACTGATTCCTATACAGCTCTGACATCTGGTGTCCAGACTGCTGGTCCAAGTTCCAAAGGTGGAGCAGATATTCAACCTTTGCAGGTTGATGATAATGTGAGTTTTGATGATATAGGTGGGCTTTCAGAATACATTGATGCTTTGAAAGAAATGGTCTTCTTCCCTTTGCTATACCCAGATTTTTTTGCAAGCTATAACATTACCCCACCAAGAGGAGTCTTGTTGTGTGGACCTCCAGGAACTGGGAAGACACTTATTGCACGAGCGTTAGCTTGTGCTGCTTCAAAAGCTGGCCAGAAAGTCAGCTTTTACATGCGTAAGGGGGCTGATGTTCTCAGCAAATGGGTTGGAGAGGCTGAACGGCAGTTGAAACTTCTTTTTGAAGAAGCTCAGCGAAATCAGCCTTCGATCATTTTCTTTGATGAAATAGATGGGCTTGCTCCTGTGCGGTCAAGCAAACAAGAGCAGATCCATAATTCTATAGTCTCAACTTTGCTTGCTCTGATGGATGGCCTTGATTCTCGTGGACAAGTTGTCTTAATTGGAGCCACAAACAGAATCGATGCTATTGACGGAGCTTTGCGTCGACCCGGTCGGTTTGACCGTGAGTTTAATTTTCCTTTGCCTGGATGTGAGGCTCGGGCTGAAATAATAGATATCCACACTCGCAAATGGAGGAACCCTCCATCCAAGGAATTAAGGATGGAACTTGCAGCTAGCTGTGTGGGTTATTGTGGTGCTGATTTAAAGGCACTATGCACTGAAGCTGCCATTCGTGCATTTCGTGAGAAATATCCTCAGGTGTACACCAGCGATGACAAATTCGTGATAGATGTTGATTCAGTTAGTGTAGAAAAATATCACTTTTTTGATGCCATGTCAACAATAACTCCTGCTGCTCACAGAGGCTCCATTGTGCATTCCAGACCACTGTCTTCTGTTGTTGCACCATGCTTGCAAAGACACCTCCGTAAAGCTATGGAATACATATCAGATATATTCCCCACTTCTGTTTTCTCATCCGAATCAGCAAAATTGTCAATGCTTTCTTATGGTTCTGCAATTCCACTGGTTTATAGGCCTCGGTTTCTGTTGAATGGCAGTGAAGGTGCTGGGCTGGATCATCTGGGGCCTGCTATTTTACATGAGCTGGAGAAGTTTCCCGTTCATTCTCTTGGGCTTCCATCTCTGCTCTCAGATCCTAGTGCAAAAACACCTGAAGAGGCTTTGGTACACATATTTAGTGAAGCACGTAGGACAACACCGTCGATACTTTATCTACCCCATTTTGATCTTTGGTGGGATAATGCACATGAACAGCTAAGAGCAGTCTTAGTCACTTTATTAGAAGAATTGCCATCTGAGTACCCTATATTGTTACTGGGAACATCCGCAAGTCTGCCTGCTGATATGGATGAGCGACATTGGATATTTACTAAACAATGCATCTATGAAGTGGACAGACCAACAATTGAAGATCGGTCTTTGTTCTTTGACCGGTTAATTGAGGCTTCTTTGTCAGTTCAATCTGAGGCTGTTCTGAAAAAACCTAAGACATCAACATCACTTCCAGAGCTTCCTAAAGCTCCTAAGGTGGTTACTGGCCCAAAGATTTCTGAGTTGAAAGCAAAGGTAGAAGCAGAGCAGCATGCACTTCGTAGATTACGAATGTGCCTTCGAGATATATGTAATCGGATCTTATATGATAAGCGTTTCAGTGCCTTCCATTATCCCGTTACTGATGAGGATGCCCCTAACTACCGCTTGATAATCCAAAATCCTATGGATGTGGCTACTTTGCTCCAGCGTGTGGATTCTGGGCAGTATATAACATGCACTGCTTTTCTTCAGGATGTTGATCTAATTTTACGCAATGCGAAGGCATATAATGGAGATGACTATAATGGAGCTAGGATTGTGAGCAGAGCACATGAGCTTCGAGATGCTGTGCATGGAATGGTTTCTCAGATGGACCCTGCACTTGTAGCATTTTGTGATAAGATTGCTGCGCAAGGAGGTCCTAGTCAGATGCCTGATGATTATGGAAGCTCTTTTGTTCAACAAACTCCTGTAGTTCAGACAATAGCTGTAACGAGGGCGAGTGCCAGGCTTCGTCATGTTCAGCCAGAAGTTAATTTGGATCGGAGTTACGAAGCATTAAAAAGATTTAAAAAGAATGTTGATGCAGTACACACAGCTGCATCTGGTGACGAGAGGATTAAACTTCAAGAACCTGTTCCTCCACTACCTACGGAAGAGCAGCAAACCAACTCTGTAACTGAGCTTGGGCTGGAGAGCCCAACTGCAGATTGCAATGAACACGAGGCCCCCACAGAAGCTCCGGAACATACATGTGAAAGAGGTCAGGAAGATGATGTTATCATGACGGATGGAGATACATCCAGCAGCCAAGTGGAAGTAATTAAGCAGCAATTTTTGAAATGCACCGAAGGGTATGGAATACCACAACTTGAAAGGCTCTATACTCGTGTTATGAAGGGTGTTTTTGAGACGAAAAATGTAGGAGGTTCAAACAATCTGAAAACCTCAATTCTTGAATTTTTGTCCAAGTTTTCTCAGGATGAGACCAACTTTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_78659.p1 GENE.S_Transcript_78659~~S_Transcript_78659.p1 ORF type:complete len:1248 (+),score=305.93,AAA|PF00004.25|2.4e-39,AAA|PF00004.25|0.32,AAA|PF00004.25|1e+03,Bromodomain|PF00439.21|2.2e-14,IstB_IS21|PF01695.13|1.7e-07 S_Transcript_78659:269-4012(+)
MHPKRSGHENENGAGTTSLNNDDNNNVPQVRTSDRIRRRPSSYSRGMFYYSSSAVASFRQKRKKAKTRTAASQIAKMLKPGARPGGRPVGRPGRRSRLYGTGGSKSNNTELDMTNLRRSTRQRRVSVNLGDYTDSSGSDEDLMKPRRYRTRNRVENSADRDELSTPKCRKVIETRSTPRREGLRPRRSKTDGRSLGMSYDDEEGSSEEKDDQDEMENVNEDEDNDDEGEGDDEGEAEGDGEGEEEGEGEDEREEDGDDEEGEEEQDGKRRYDLRNRADVRRLSMEQGKQRARSPRRVLHHGMGTKVNRDVRKGGSRVHKRHRFARIEDSDDSLLVDELEQGPAIPWARSGSRSGPPWLLGGLDMHGATSWGLNVAASGWGHQTDSYTALTSGVQTAGPSSKGGADIQPLQVDDNVSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYNITPPRGVLLCGPPGTGKTLIARALACAASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEIDGLAPVRSSKQEQIHNSIVSTLLALMDGLDSRGQVVLIGATNRIDAIDGALRRPGRFDREFNFPLPGCEARAEIIDIHTRKWRNPPSKELRMELAASCVGYCGADLKALCTEAAIRAFREKYPQVYTSDDKFVIDVDSVSVEKYHFFDAMSTITPAAHRGSIVHSRPLSSVVAPCLQRHLRKAMEYISDIFPTSVFSSESAKLSMLSYGSAIPLVYRPRFLLNGSEGAGLDHLGPAILHELEKFPVHSLGLPSLLSDPSAKTPEEALVHIFSEARRTTPSILYLPHFDLWWDNAHEQLRAVLVTLLEELPSEYPILLLGTSASLPADMDERHWIFTKQCIYEVDRPTIEDRSLFFDRLIEASLSVQSEAVLKKPKTSTSLPELPKAPKVVTGPKISELKAKVEAEQHALRRLRMCLRDICNRILYDKRFSAFHYPVTDEDAPNYRLIIQNPMDVATLLQRVDSGQYITCTAFLQDVDLILRNAKAYNGDDYNGARIVSRAHELRDAVHGMVSQMDPALVAFCDKIAAQGGPSQMPDDYGSSFVQQTPVVQTIAVTRASARLRHVQPEVNLDRSYEALKRFKKNVDAVHTAASGDERIKLQEPVPPLPTEEQQTNSVTELGLESPTADCNEHEAPTEAPEHTCERGQEDDVIMTDGDTSSSQVEVIKQQFLKCTEGYGIPQLERLYTRVMKGVFETKNVGGSNNLKTSILEFLSKFSQDETNF*

Click here to download the sequence:
Link to NCBI Protein BLAST