Transcript Information: S_Transcript_78672.p1


Annotated TAIR IDAT5G67570.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)EMB246, DG1, EMB1408
Annotation TypeOrtholog
Chromosome Positionchr5:26952352-26955480 | Forward length=798
E-Value2.4E-185
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 110.636587872313
Replicate 29.1749788289341
Replicate 38.206719131052
Condition 2: 8 Hour
Replicate 113.768334525139
Replicate 216.326381450674
Replicate 314.83141500023
Condition 3: 24 Hour
Replicate 16.9988461668894
Replicate 29.0948628979517
Replicate 37.3870388953495


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_78672.p1 GENE.S_Transcript_78672~~S_Transcript_78672.p1 ORF type:complete len:618 (+),score=139.62,PPR_2|PF13041.2|2e+03,PPR_2|PF13041.2|0.0021,PPR_2|PF13041.2|5.5e-05,PPR_2|PF13041.2|0.1,PPR_2|PF13041.2|9.4,PPR_2|PF13041.2|1.1,PPR_2|PF13041.2|0.029,PPR_2|PF13041.2|1.1,PPR|PF01535.16|16,PPR|PF01535.16|1.7,PPR|PF01535.16|1.5,PPR|PF01535.16|0.0065,PPR|PF01535.16|90,PPR|PF01535.16|30,PPR|PF01535.16|0.0028,PPR|PF01535.16|13,PPR_3|PF13812.2|9.4e+02,PPR_3|PF13812.2|0.0096,PPR_3|PF13812.2|24,PPR_3|PF13812.2|0.43,PPR_3|PF13812.2|1.2e+03,PPR_3|PF13812.2|2.9e+02,PPR_3|PF13812.2|2.7e+02,PPR_3|PF13812.2|4.1,PPR_3|PF13812.2|1.9e+03,PPR_1|PF12854.3|48,PPR_1|PF12854.3|0.031,PPR_1|PF12854.3|1.2e+02,PPR_1|PF12854.3|7.4e+02,PPR_1|PF12854.3|18,PPR_1|PF12854.3|2.4e+02 S_Transcript_78672:1113-2966(+)
ATGGCCGCTTACCACAGTATTGCTGTTACTCTTGGTCAAGCTGGAATGGTGAGGGAGTTGTTAAGGGTCATTGAATGTATGAAGGAGAAGCCTTCTCGGACAATTAAGAATATGCACCAGAAGAACTGGGATCCCACCCTTCAACCTGATATTGTTGTATTTAATTCTGTACTGAATGCTTGTGTTCCATCTCATCAGTGGAAGGGGGTTTCATGGGTTTTTGAGCAACTGAGGAAGGGTGGTTTGAAAGCTAATGGTGCTACATATGGACTTGCAATGGAGGTAATGCTACATTCTGAGAAGTATGATCTTGTTCATGAGCTGTTTCAAAAAATGAAAAGAAGTGGGGAGTCGCCAAAAGCTCTTACATACAAAGTTCTGGTGAGAACTTTTTGGAAGGAGAATAAAGTTGAGGAAGCCATCCGTACAGTAAGGGAGATGGAACAAAAGGGAATAATTGTATCAGCCAGCGTGTACTATGAACTAGCATGCTGCCTTTGCAACAAGGGAAGATGGCAAGAAGCAATGGCCGAGATTGAGAAGCTGAAAAGGCTAAGGCACTCGAAACCGCTGGTGGTTGCCTTCACTGGCATGATACTATCTTCTATGGATGGAGGACATGTAAATGATTGTGTGTCAATTTTTGAGCACATGCAAGACCATTGTGCTCCTAACATCGGGACTGTTAATGCAATGCTCAAGGTTTACAGTCGCAATGACATGTTCTTAGAGGCCAAGGACTTGTTTGAGAGTGTCAAAAGACCAATGGCTGGACACAGGGCTTGTCTTGGCAATGGCGACGCTACCCTAATTCCTGATGTATATACATATGTCTCAATGCTTGAAGCATCTGGTCGCGCTCATCAGTGGGAATATTTTGAATATTTGTACAAGGAAATGTGTATATCTGGATACCAGCTTGATCAGGGTAAACATGCATCTCTACTTGTGGAAGCATCAAAATCTGGAAAGTGGCATTTGCTGGAGCATGCTTTTGACGCAATTTTGGAGGCTGGAGAAATCCCGCATCCCACTCTGTTCTCTGAAATGGTTCTTCAGGCCATGATCCAGGATGATTATGGAAAGGCTGCTACGATAGTGAATGCAATGGCCCATGCCCCCTTTCAATTGCATATGTTAGATTGGATGGGTCTTTTCAAGAAGAATAAAGATAGGATCAGTGACGAACACCTGAAGAAGTTATCATATAGTCTTTGTAATCGTGACATTCCAGAACGATCCTCAGTCTCAGAGCTGCTCAAAGCATTGGATTCTATTTGTGGGAGCATTCAATCTAGCAGTAGATGTACTGAGAGGTCATCAATTGTAAGTTTCCACAACAATGGTGCTATCTGTGATTCATATGTTGCCCCAGATGCAGATATCTATGGAGCAAATGGCGTCTACGCCACTGGAGATCAAGAATTGCATGATGATGACTCTGATTGGGATAAAGAATCTCTCAGTCGATCTAATGAAGTGGAGGATGGTACCGATGACTTGCATGCCCTCTGTCCTAGCTGTGATTTTGATGATTATCCTAGCTCGTCCGATGAATATGATGATTGTTTTGATGAGCATGCGAATTCGCATATTCGGTATGCTTCTAATGAAGTGCAACCACCTCATTTCTCGAATTCTAATCTCAATACTGCTTGCAATGAACCAGAGGTACCCTCAGCAGATGATATATTGAAATCTTGGAAGAAACCAGACAAAAGGATGCAGTCAAGTGTTAGTCCAAGCTTGGCTGAAACTAGTGGATGCCGTTCCAATATTGCTTTTAGATGCTTTGTGCATATTTCTACTGCCAGTAAATATTTTGTGACCGGTGGAAATGTAAAATATCCATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_78672.p1 GENE.S_Transcript_78672~~S_Transcript_78672.p1 ORF type:complete len:618 (+),score=139.62,PPR_2|PF13041.2|2e+03,PPR_2|PF13041.2|0.0021,PPR_2|PF13041.2|5.5e-05,PPR_2|PF13041.2|0.1,PPR_2|PF13041.2|9.4,PPR_2|PF13041.2|1.1,PPR_2|PF13041.2|0.029,PPR_2|PF13041.2|1.1,PPR|PF01535.16|16,PPR|PF01535.16|1.7,PPR|PF01535.16|1.5,PPR|PF01535.16|0.0065,PPR|PF01535.16|90,PPR|PF01535.16|30,PPR|PF01535.16|0.0028,PPR|PF01535.16|13,PPR_3|PF13812.2|9.4e+02,PPR_3|PF13812.2|0.0096,PPR_3|PF13812.2|24,PPR_3|PF13812.2|0.43,PPR_3|PF13812.2|1.2e+03,PPR_3|PF13812.2|2.9e+02,PPR_3|PF13812.2|2.7e+02,PPR_3|PF13812.2|4.1,PPR_3|PF13812.2|1.9e+03,PPR_1|PF12854.3|48,PPR_1|PF12854.3|0.031,PPR_1|PF12854.3|1.2e+02,PPR_1|PF12854.3|7.4e+02,PPR_1|PF12854.3|18,PPR_1|PF12854.3|2.4e+02 S_Transcript_78672:1113-2966(+)
MAAYHSIAVTLGQAGMVRELLRVIECMKEKPSRTIKNMHQKNWDPTLQPDIVVFNSVLNACVPSHQWKGVSWVFEQLRKGGLKANGATYGLAMEVMLHSEKYDLVHELFQKMKRSGESPKALTYKVLVRTFWKENKVEEAIRTVREMEQKGIIVSASVYYELACCLCNKGRWQEAMAEIEKLKRLRHSKPLVVAFTGMILSSMDGGHVNDCVSIFEHMQDHCAPNIGTVNAMLKVYSRNDMFLEAKDLFESVKRPMAGHRACLGNGDATLIPDVYTYVSMLEASGRAHQWEYFEYLYKEMCISGYQLDQGKHASLLVEASKSGKWHLLEHAFDAILEAGEIPHPTLFSEMVLQAMIQDDYGKAATIVNAMAHAPFQLHMLDWMGLFKKNKDRISDEHLKKLSYSLCNRDIPERSSVSELLKALDSICGSIQSSSRCTERSSIVSFHNNGAICDSYVAPDADIYGANGVYATGDQELHDDDSDWDKESLSRSNEVEDGTDDLHALCPSCDFDDYPSSSDEYDDCFDEHANSHIRYASNEVQPPHFSNSNLNTACNEPEVPSADDILKSWKKPDKRMQSSVSPSLAETSGCRSNIAFRCFVHISTASKYFVTGGNVKYP*

Click here to download the sequence:
Link to NCBI Protein BLAST