Transcript Information: S_Transcript_78673.p1


Annotated TAIR IDAT5G67570.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)EMB246, DG1, EMB1408
Annotation TypeOrtholog
Chromosome Positionchr5:26952352-26955480 | Forward length=798
E-Value1.5E-138
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.4674920176131
Replicate 22.2997044489918
Replicate 34.3854063000093
Condition 2: 8 Hour
Replicate 14.3762201627993
Replicate 25.9026701622732
Replicate 34.1659637012993
Condition 3: 24 Hour
Replicate 14.7674501428984
Replicate 24.3555859381254
Replicate 33.0397903680433


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_78673.p1 GENE.S_Transcript_78673~~S_Transcript_78673.p1 ORF type:complete len:307 (+),score=63.76,PPR_2|PF13041.2|8.3e+02,PPR_2|PF13041.2|0.00082,PPR_2|PF13041.2|2.1e-05,PPR_2|PF13041.2|0.26,PPR_2|PF13041.2|3.6,PPR_2|PF13041.2|0.69,PPR_2|PF13041.2|0.033,PPR_2|PF13041.2|2.3e+03,PPR|PF01535.16|6.9,PPR|PF01535.16|0.68,PPR|PF01535.16|0.64,PPR|PF01535.16|0.0029,PPR|PF01535.16|26,PPR|PF01535.16|12,PPR|PF01535.16|0.0027,PPR_3|PF13812.2|3.9e+02,PPR_3|PF13812.2|0.0039,PPR_3|PF13812.2|9.7,PPR_3|PF13812.2|0.26,PPR_3|PF13812.2|4.3e+02,PPR_3|PF13812.2|1.2e+02,PPR_3|PF13812.2|7.3e+02,PPR_3|PF13812.2|7.1e+02,PPR_1|PF12854.3|21,PPR_1|PF12854.3|7.3e+03,PPR_1|PF12854.3|0.013,PPR_1|PF12854.3|41,PPR_1|PF12854.3|3.1e+02,PPR_1|PF12854.3|17 S_Transcript_78673:1113-2033(+)
ATGGCCGCTTACCACAGTATTGCTGTTACTCTTGGTCAAGCTGGAATGGTGAGGGAGTTGTTAAGGGTCATTGAATGTATGAAGGAGAAGCCTTCTCGGACAATTAAGAATATGCACCAGAAGAACTGGGATCCCACCCTTCAACCTGATATTGTTGTATTTAATTCTGTACTGAATGCTTGTGTTCCATCTCATCAGTGGAAGGGGGTTTCATGGGTTTTTGAGCAACTGAGGAAGGGTGGTTTGAAAGCTAATGGTGCTACATATGGACTTGCAATGGAGGTAATGCTACATTCTGAGAAGTATGATCTTGTTCATGAGCTGTTTCAAAAAATGAAAAGAAGTGGGGAGTCGCCAAAAGCTCTTACATACAAAGTTCTGGTGAGAACTTTTTGGAAGGAGAATAAAGTTGAGGAAGCCATCCGTACAGTAAGGGAGATGGAACAAAGGGGAATAATCGGATCAGCCAGCGTGTACTATGATCTAGCATGCTGCCTTTGCAACAAGGGAAGATGGCAAGAAGCAATGGCCGAGATTGAGAAGCTGAAAAGGCTAAGGCACTCGAAACCGCTGGTGGTTGCCTTCACTGGCATGATACTATCTTCTATGGATGGAGGACATGTAAATGATTGTGTGTCAATTTTTGAGCACATGCAAGACCATTGTGCTCCTAACATCGGGACTGTTAATGCAATGCTCAAGGTTTACAGTCGCAATGACATGTTCTTAGAGGCCAAGGACTTCTTTGAGAGCGTCAAAAGAGCAATGGCTGGATGCGGGGCTTGTCTTGGCAATGGCAACGCTACCCTTATTCCTGATGTATATATGTTTGTCTCAATGCTTGAAGCATCTAGTCGCGCTCATCAATGGGAATATTTTGAATGTGTACAAGGAAATGTGTATATCTGGATACCAGCTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_78673.p1 GENE.S_Transcript_78673~~S_Transcript_78673.p1 ORF type:complete len:307 (+),score=63.76,PPR_2|PF13041.2|8.3e+02,PPR_2|PF13041.2|0.00082,PPR_2|PF13041.2|2.1e-05,PPR_2|PF13041.2|0.26,PPR_2|PF13041.2|3.6,PPR_2|PF13041.2|0.69,PPR_2|PF13041.2|0.033,PPR_2|PF13041.2|2.3e+03,PPR|PF01535.16|6.9,PPR|PF01535.16|0.68,PPR|PF01535.16|0.64,PPR|PF01535.16|0.0029,PPR|PF01535.16|26,PPR|PF01535.16|12,PPR|PF01535.16|0.0027,PPR_3|PF13812.2|3.9e+02,PPR_3|PF13812.2|0.0039,PPR_3|PF13812.2|9.7,PPR_3|PF13812.2|0.26,PPR_3|PF13812.2|4.3e+02,PPR_3|PF13812.2|1.2e+02,PPR_3|PF13812.2|7.3e+02,PPR_3|PF13812.2|7.1e+02,PPR_1|PF12854.3|21,PPR_1|PF12854.3|7.3e+03,PPR_1|PF12854.3|0.013,PPR_1|PF12854.3|41,PPR_1|PF12854.3|3.1e+02,PPR_1|PF12854.3|17 S_Transcript_78673:1113-2033(+)
MAAYHSIAVTLGQAGMVRELLRVIECMKEKPSRTIKNMHQKNWDPTLQPDIVVFNSVLNACVPSHQWKGVSWVFEQLRKGGLKANGATYGLAMEVMLHSEKYDLVHELFQKMKRSGESPKALTYKVLVRTFWKENKVEEAIRTVREMEQRGIIGSASVYYDLACCLCNKGRWQEAMAEIEKLKRLRHSKPLVVAFTGMILSSMDGGHVNDCVSIFEHMQDHCAPNIGTVNAMLKVYSRNDMFLEAKDFFESVKRAMAGCGACLGNGNATLIPDVYMFVSMLEASSRAHQWEYFECVQGNVYIWIPA*

Click here to download the sequence:
Link to NCBI Protein BLAST