Transcript Information: S_Transcript_78877.p1


Annotated TAIR IDAT5G65910.1
Annotated Gene NameBSD domain-containing protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:26361592-26363341 | Reverse length=432
E-Value2.9E-115
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 124.351765836113
Replicate 227.734704955743
Replicate 325.434100089149
Condition 2: 8 Hour
Replicate 132.661763383321
Replicate 232.948517822343
Replicate 333.668822469742
Condition 3: 24 Hour
Replicate 130.792243177373
Replicate 224.293235938046
Replicate 329.672993417784


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_78877.p1 GENE.S_Transcript_78877~~S_Transcript_78877.p1 ORF type:complete len:459 (+),score=122.48,BSD|PF03909.13|4.1e-12 S_Transcript_78877:441-1817(+)
ATGTCATGGTTAGTGAGCTCCATCGCAAATTCTCTCAAGCTAGACGACGATGACGAGGACATTGTCGGTGCTCAATCAGGCAATGCCAACATCTCATCTACATCTAATTCCGAAGAAAGTCACTCATCGGAATCTCGAAACCCTAATAATGTCGACGCAGATCAATCGATTCCCCCTCGAGGCGTCAAGGAAGACCTCTCCGAGATCTCCAAAACCCTAACTCGTCAATTCTGGGGCGTCGCCTCATTCCTCGCTCCTCCTCCTTCTCAGATCTCCGATCGAGATCCACAACCGGATGATGACGATCCGAATTCGGTGGATCCAGCTGGAATAGTAGGTATACGGAATGATTTGTCGGAGATTGGGGGAAAGTTCAGGACAGGAATATCAAAGCTGTCGAGTAACAAGGCGGTTTCGGAGTTCACAAAGATGGCGTCGAATATCCTGCAGTTTGGATCAGACAAGGATTTAACAATGGAGGAATATGCTCAGCGAGGTGTGGTTGGTGTTACTGAAGAGGTTGTGGCCTTTGCTAGGGATATTGCTTTGCATCCTGAGACTTGGCTTGACTTCCCTTTGCCTGATGATGACGATGACGATCAAGATTTTGACTTGTCTGATGCCCAGCAAGAACATGCATTTGCTGTCGAATCTCTTGCACCTGAATTGGCTGCCCTTAGGACTGAGCTTTGCCTGGGCTACATGAGTGAGGCATGCTTTTGGAAAATCTATTTTGTGCTTGTGCATCCCAGACTTAGCAGACGTGATGCTGAAGTATTGTCTACTCCTGAGATTGTGAGAGCCAGAGCAATGTTAGCCCATGAGTTGCAGAACCATGGTAAACCAAAGTCATATGAATCTGCTACTGTCAATAACTATGCTGATACGACCAAATTGCCAAATGAACATCTGTTGGTTCCAGTTGTTGATCAGTCTGAATCTGTACCAGTTGAAATATCAGTTGTTGAGCCAGCCTCGTCTGCTGAAGCTAATCTTGAGATAGACAAGCATCCACTCACAAGCACTGAAATTCCAGTTATTGACAAGGCTGTTGTAGAAGAAGTTTCAGTGAAACAATCAAACATCGAGAAGCCAGCACCCAGCATGTCTGCCAATGTAGTTCACAAAGATGAAAACGATGAAAATGATGCAGATGATTGGTTGAGAGAGGAGAACAATGAAGCAGGGGAATTCAAAGGAACTTCCTATCCGCTGGAAAATGATGATGATGATATATCGTTCAGTGATCTTGAGGATGATGATGTGCCCACAAATTCAGAAAACGGTGGTCACTCTAATGACAAGGTCAGTAGTGTTACCCTAAAGAAGAAGGAATCCAGTGACTGGCTGGATGTTGAGGATATTGATGTTGCATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_78877.p1 GENE.S_Transcript_78877~~S_Transcript_78877.p1 ORF type:complete len:459 (+),score=122.48,BSD|PF03909.13|4.1e-12 S_Transcript_78877:441-1817(+)
MSWLVSSIANSLKLDDDDEDIVGAQSGNANISSTSNSEESHSSESRNPNNVDADQSIPPRGVKEDLSEISKTLTRQFWGVASFLAPPPSQISDRDPQPDDDDPNSVDPAGIVGIRNDLSEIGGKFRTGISKLSSNKAVSEFTKMASNILQFGSDKDLTMEEYAQRGVVGVTEEVVAFARDIALHPETWLDFPLPDDDDDDQDFDLSDAQQEHAFAVESLAPELAALRTELCLGYMSEACFWKIYFVLVHPRLSRRDAEVLSTPEIVRARAMLAHELQNHGKPKSYESATVNNYADTTKLPNEHLLVPVVDQSESVPVEISVVEPASSAEANLEIDKHPLTSTEIPVIDKAVVEEVSVKQSNIEKPAPSMSANVVHKDENDENDADDWLREENNEAGEFKGTSYPLENDDDDISFSDLEDDDVPTNSENGGHSNDKVSSVTLKKKESSDWLDVEDIDVA*

Click here to download the sequence:
Link to NCBI Protein BLAST