Transcript Information: S_Transcript_78882.p1


Annotated TAIR IDAT5G65910.1
Annotated Gene NameBSD domain-containing protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:26361592-26363341 | Reverse length=432
E-Value2E-15
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 16.6985105149774
Replicate 26.6038281668752
Replicate 34.3911276389525
Condition 2: 8 Hour
Replicate 14.7873325201727
Replicate 29.7401245778402
Replicate 37.3952940670343
Condition 3: 24 Hour
Replicate 18.619069676561
Replicate 29.5588865151941
Replicate 33.0884136006265


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_78882.p1 GENE.S_Transcript_78882~~S_Transcript_78882.p1 ORF type:5prime_partial len:147 (+),score=50.88 S_Transcript_78882:1-441(+)
GAACATCTGTTGGTTCCAGTTGTTGATCAGTCTGAATCTGTACCAGTTGAAATATCAGTTGTTGAGCCAGCCTCGTCTGCTGAAGCTAATCTTGAGATAGACAAGCATCCACTCACAAGCACTGAAATTCCAGTTATTGACAAGGCTGTTGTAGAAGAAGTTTCAGTGAAACAATCAAACATCGAGAAGCCAGCACCCAGCATGTCTGCCAATGTAGTTCACAAAGATGAAAACGATGAAAATGATGCAGATGATTGGTTGAGAGAGGAGAACAATGAAGCAGGGGAATTCAAAGGAACTTCCTATCCGCTGGGAAATGATGATGATGATATATCATTTAGTGATCTTGAGGAGGATGATGTGCCCACAAATTCAGAAAACGGTGGTCACTCTAATGACAAGGTCAGTAGTGTTTACCCTAAAGAAGAAGGAATCCAGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_78882.p1 GENE.S_Transcript_78882~~S_Transcript_78882.p1 ORF type:5prime_partial len:147 (+),score=50.88 S_Transcript_78882:1-441(+)
EHLLVPVVDQSESVPVEISVVEPASSAEANLEIDKHPLTSTEIPVIDKAVVEEVSVKQSNIEKPAPSMSANVVHKDENDENDADDWLREENNEAGEFKGTSYPLGNDDDDISFSDLEEDDVPTNSENGGHSNDKVSSVYPKEEGIQ*

Click here to download the sequence:
Link to NCBI Protein BLAST