Transcript Information: S_Transcript_78956.p1


Annotated TAIR IDAT1G47380.1
Annotated Gene NameProtein phosphatase 2C family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:17373004-17375305 | Reverse length=428
E-Value1.4E-258
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 19.1404466859148
Replicate 29.6395832879796
Replicate 39.6953635953508
Condition 2: 8 Hour
Replicate 19.0184477743016
Replicate 28.4155785770934
Replicate 39.3630358638703
Condition 3: 24 Hour
Replicate 17.6559171111895
Replicate 28.0488302794505
Replicate 38.1912714306335


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_78956.p1 GENE.S_Transcript_78956~~S_Transcript_78956.p1 ORF type:complete len:428 (+),score=83.64,PP2C|PF00481.17|8.6e-31 S_Transcript_78956:340-1623(+)
ATGTCGTCGAGAGGCGATCATCAAACGGTTCCGTTATCGGTGTTATTGAAGCGAGAACAGAATAGTGAGAAAATCGAGAATCCGGAACTTTTTTATGGTCAAGCAAGTCAAAGTAAGAAAGGCGAAGATTTCACTCTCTTGAAGACCGAATGCCAACGTATTGTTGGCGATGGTGTTACCACTTTCTCTGTTTTCGGGTTGTTTGATGGACATAATGGATCTGCAGCAGCTATATATACGAAGGAGCATCTGTTAAGTAATGTGTTGAACGCTATACCATCGGATCTTAATCGAGAAGATTGGGTAGCTGCACTGCCGAGAGCATTGGTGGCAGGATTTGTCAAAACAGACAAGGATTTTTTGGAGAAAGGGCAAGCGTCAGGAACTACTGTTACCTTTGTGATTATTGAAGGATGGTCTATAACTGTTGCGTCAGTGGGGGACTCGCGCTGCATACTTGAATCTGCTGAGGGTGATATATATTCGTTATCTGCGGATCACCGCCTTGAAAGCAATGTAGAAGAGAGAGAACGTGTCACTGCCAGTGGTGGTGAGGTTGGTAGGCTCAATACTGGTGGTGGGACGGAGATTGGTCCTTTGAGATGTTGGCCTGGTGGCTTATGTCTCTCACGATCTATTGGAGATAGAGATGTTGGCGAGTTTATAGTTCCAGTTCCTTATGTAAAACAAGTGAGGCTATCAAGTGCTGGAGGAAGACTTATCATATCCAGTGATGGTGTTTGGGATATTTTAAGTTTTGAAGCAGTATTTGATTGTTGTAGGGGGTTGTCTGCAGAGGCCGCAGCCGCACAAATTGTTAAAGAAGCGGTGCAAGTGAAGGGCTTAAGAGATGATACCACCTGCATTGTTGTTGATATCCTTCCACCTGAGAAGAACCCTCCTCCTTTGCCTCCCCCAAAGAAACCAGGAAGAGGAGTCTTTAAAGCCATGTTTCGAAAGAAACCTGCCGAGTCATCTTCACACAACGAAAAGGAGTACTTGGAACCAGATGTTGTTGAGGAGATGTTTGAAGAAGGATCTGCATGCCTTTCAGAAAGGTTAGAAACAAAGTACCCCCTATGCAATATGTTCAAATTGTTCATGTGTGCCATTTGTCAAGTGGAGATTAAACCTGGAGATGGTATTTCAATACATGCTGGTTCTTCAAATCGGAAAACTCGTCCATGGGATGGCCCGTTCTTGTGCCAAAGTTGCCAAGAAAAGCGAGAAGCCATGGAAGGGAAAAGACCGTCAGGAGATAGATACAGCAGTGGAAGCGACTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_78956.p1 GENE.S_Transcript_78956~~S_Transcript_78956.p1 ORF type:complete len:428 (+),score=83.64,PP2C|PF00481.17|8.6e-31 S_Transcript_78956:340-1623(+)
MSSRGDHQTVPLSVLLKREQNSEKIENPELFYGQASQSKKGEDFTLLKTECQRIVGDGVTTFSVFGLFDGHNGSAAAIYTKEHLLSNVLNAIPSDLNREDWVAALPRALVAGFVKTDKDFLEKGQASGTTVTFVIIEGWSITVASVGDSRCILESAEGDIYSLSADHRLESNVEERERVTASGGEVGRLNTGGGTEIGPLRCWPGGLCLSRSIGDRDVGEFIVPVPYVKQVRLSSAGGRLIISSDGVWDILSFEAVFDCCRGLSAEAAAAQIVKEAVQVKGLRDDTTCIVVDILPPEKNPPPLPPPKKPGRGVFKAMFRKKPAESSSHNEKEYLEPDVVEEMFEEGSACLSERLETKYPLCNMFKLFMCAICQVEIKPGDGISIHAGSSNRKTRPWDGPFLCQSCQEKREAMEGKRPSGDRYSSGSD*

Click here to download the sequence:
Link to NCBI Protein BLAST