Transcript Information: S_Transcript_78989.p1


Annotated TAIR IDAT4G24204.3
Annotated Gene NameRING/U-box superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:12562069-12562815 | Reverse length=178
E-Value5.6E-27
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 112.801190467555
Replicate 211.869222230309
Replicate 311.088986885709
Condition 2: 8 Hour
Replicate 16.4785995900151
Replicate 212.17708217099
Replicate 39.0389986679351
Condition 3: 24 Hour
Replicate 19.8163716951404
Replicate 29.3237199522948
Replicate 38.7798255840594


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_78989.p1 GENE.S_Transcript_78989~~S_Transcript_78989.p1 ORF type:complete len:158 (+),score=18.08,zf-C3HC4_3|PF13920.2|1.4e+04,zf-C3HC4_3|PF13920.2|4.8e+03,zf-C3HC4_3|PF13920.2|1e-13,zf-C3HC4_2|PF13923.2|1.6e+04,zf-C3HC4_2|PF13923.2|5.4e+03,zf-C3HC4_2|PF13923.2|6.7e-06 S_Transcript_78989:479-952(+)
ATGGAATGCCTTCCTTGCTTAGTCTACTCATTCATGGGCCGTTTGGCCACTTATTTTGGTATTTTAGCTCTATTCATTGTGATAAGTTATGTGATCCTCAAGTGTGTAGGAGAATGGAGAGAGAGGAATTCAGATGATGGAGAAGAAAGTGAAAGTAGCCCTTTGATGGCTCAATGTTATGTTAGCAAGACATTCACAGTTTACGGAGCATGCCAACAAGATTTAGAGTCCGGAAATTGTAGCAGCAGTAGTAGTAGTAGCAGTAGCAACAGCAATAGGAAGTGTTCAGAGGAATTATATGATGCTAAAATTTGTGTCATTTGCTATGACCAACAAAGGAACTGTTTCTTTGTGCCTTGTGGACATTGTGCCACCTGCCAAGTTTGCGCCCAAAGGATATTTCACAAGGAGAATAGAATTTGCCCAGTGTGCCGAAGACTCATTGGAAAAGTTAGAAGATTGTACAATTCTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_78989.p1 GENE.S_Transcript_78989~~S_Transcript_78989.p1 ORF type:complete len:158 (+),score=18.08,zf-C3HC4_3|PF13920.2|1.4e+04,zf-C3HC4_3|PF13920.2|4.8e+03,zf-C3HC4_3|PF13920.2|1e-13,zf-C3HC4_2|PF13923.2|1.6e+04,zf-C3HC4_2|PF13923.2|5.4e+03,zf-C3HC4_2|PF13923.2|6.7e-06 S_Transcript_78989:479-952(+)
MECLPCLVYSFMGRLATYFGILALFIVISYVILKCVGEWRERNSDDGEESESSPLMAQCYVSKTFTVYGACQQDLESGNCSSSSSSSSSNSNRKCSEELYDAKICVICYDQQRNCFFVPCGHCATCQVCAQRIFHKENRICPVCRRLIGKVRRLYNS*

Click here to download the sequence:
Link to NCBI Protein BLAST