Transcript Information: S_Transcript_79003.p1


Annotated TAIR IDAT1G43700.1
Annotated Gene NameVIRE2-interacting protein 1
Annotated Gene Symbol(s)VIP1, SUE3
Annotation TypeOrtholog
Chromosome Positionchr1:16484352-16486017 | Forward length=341
E-Value2.7E-70
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 17.0593172290502
Replicate 27.3542631858383
Replicate 37.2731916949411
Condition 2: 8 Hour
Replicate 15.7067945919088
Replicate 25.9343166579556
Replicate 37.9058777502043
Condition 3: 24 Hour
Replicate 17.1277906225178
Replicate 26.3309708394022
Replicate 35.5062209616803


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_79003.p1 GENE.S_Transcript_79003~~S_Transcript_79003.p1 ORF type:5prime_partial len:426 (+),score=87.32,bZIP_2|PF07716.11|4.7e-08,bZIP_2|PF07716.11|24,bZIP_1|PF00170.17|1.4e+04,bZIP_1|PF00170.17|8.1e-08,bZIP_1|PF00170.17|2.9,bZIP_1|PF00170.17|32 S_Transcript_79003:3-1280(+)
CTGGACTTGGAGTTGGACGGACGAACTTTCTTTCTGTCTCTCCTCACCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCTTACTAATTATTGCTGTCTCAACTTTCAACTTCCAACTTCCCTTCACCACTACAACCGCCGCAACCACTGCAACCCTAATGAACCCATCAAACTACTCGAAGCCCAATCCAAGCCCATTTCCACCGGGCCTACGAGGCCCAATCGAAGTGGACCCAACTCCCCAAAGACTACCAGGCCACCGGCGGGCCCACTCAGACACGACTTTCCGATTCTCCGGAGATGAAGACGAAGACTTCCTCTTTGACCTCGACAACTTCAATCTCTCCTCTCTCGACATGCCCCCTTGTGGTAGTCCCCACCAAGGGGCCCCACCTCTTCCTATGGCCGTTGATTCGTCCAAGTCAGACGAATCTAGTGGGGACAACAGGTCATCGTCCACTTCATCCCGGGCCCACCACCTTGGTGCTGGTGGTTCTGGTGGTGGTGGACATCATCATGTGAGGAGCTTGTCTGTGGATGCGGATTTCTTCGACGGGCTTTCGTCGTTCGGTGGTGCTGGAGGAGAGAGAAAAGTGGGGGGAGCTGGTCATCGGAGGACGAGTTCCATGGATGGAGGGAGTTCGAGTTCGATGATGTTGTTTGAAGGCGGGGATTCGGTTATGGATGGTGTTAAGAAAGCTATGCCCCCTGAGAAACTCGCTGAGCTCGCTCTCATTGACCCTAAACGCGCTAAAAGAATTCTTGCAAACAGACAATCTGCAGCACGTTCAAAGGAAAGGAAAATAAGATACACTAATGAGTTGGAGAGGAAGGTACAGACACTGCAGACTGAAGCGACCACCCTTTCGGCACAAGTCACGATGCTGCAGAGAGACACTACAGGGCTAACTGCTGAGAACAAGGAACTTAAGCTACGTCTGCAGGCACTGGAGCAGCAAGCACAACTTAGAGATGCTCTAAATGAAGCCTTGAGGCAAGAAGTTCAAAGGCTGAGGATAGCTACTGGGCAAAACAACAACTCTACCAGTAGAGGACTCTTTCCCCAGTTTCCGACACATTCTCAGTCCCAGAACATGCCTCCATTTGGTGGCCAGCCGAATCATCAGCAGCAGCCACAACCGCAGCAGTCACAACGACAGCCACAATCACAGCATTTTCAAATGCCGAGTCAGCCATCAGGTGGCAATCAGAATAATGTTCACAAGCAGCAGCCGAAACCGAGCTTCTTGGACTTCAATCATAGGGTGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_79003.p1 GENE.S_Transcript_79003~~S_Transcript_79003.p1 ORF type:5prime_partial len:426 (+),score=87.32,bZIP_2|PF07716.11|4.7e-08,bZIP_2|PF07716.11|24,bZIP_1|PF00170.17|1.4e+04,bZIP_1|PF00170.17|8.1e-08,bZIP_1|PF00170.17|2.9,bZIP_1|PF00170.17|32 S_Transcript_79003:3-1280(+)
LDLELDGRTFFLSLLTFLPSFLPSFLPSFLLIIAVSTFNFQLPFTTTTAATTATLMNPSNYSKPNPSPFPPGLRGPIEVDPTPQRLPGHRRAHSDTTFRFSGDEDEDFLFDLDNFNLSSLDMPPCGSPHQGAPPLPMAVDSSKSDESSGDNRSSSTSSRAHHLGAGGSGGGGHHHVRSLSVDADFFDGLSSFGGAGGERKVGGAGHRRTSSMDGGSSSSMMLFEGGDSVMDGVKKAMPPEKLAELALIDPKRAKRILANRQSAARSKERKIRYTNELERKVQTLQTEATTLSAQVTMLQRDTTGLTAENKELKLRLQALEQQAQLRDALNEALRQEVQRLRIATGQNNNSTSRGLFPQFPTHSQSQNMPPFGGQPNHQQQPQPQQSQRQPQSQHFQMPSQPSGGNQNNVHKQQPKPSFLDFNHRV*

Click here to download the sequence:
Link to NCBI Protein BLAST