Transcript Information: S_Transcript_79018.p1


Annotated TAIR IDAT1G27752.1
Annotated Gene NameUbiquitin system component Cue protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:9662250-9667318 | Forward length=873
E-Value1.7E-301
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 113.96091868075
Replicate 214.079883265627
Replicate 314.620295466742
Condition 2: 8 Hour
Replicate 121.650015696668
Replicate 219.568818423742
Replicate 317.696646313737
Condition 3: 24 Hour
Replicate 113.812923987027
Replicate 213.853055787885
Replicate 313.880984625766


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_79018.p1 GENE.S_Transcript_79018~~S_Transcript_79018.p1 ORF type:complete len:854 (+),score=190.03,CUE|PF02845.12|6.1e-10 S_Transcript_79018:147-2708(+)
ATGTCGAACCGATCAGCAAGCTACCGCCAAGAAACCAACAGCAGAGGTTTTAGGGGCAAGACCCAGAAAAAATTCGTCCCGAAAAACCCACCTATTTCATCACTTCCAAACACCACAACAACCGCCAATCCTACTCTCTCAGCTTCACTCCGTCAATCCATTTCAGGCCTACCGTCAACTAGCGGAAGCGGGTCCGGGTCGGGTCGACAAAGTAGGGTCCGATTGGGAGATAATGGGGAATGGGTTTCAAGTAAAACTCAAAGTGGTGGTGGCGGCGGCAATTTTGTTAATTACTTGCCTCAAGATGAAGCTGTGGCTGTTGGTTTGAGCGCAGAAGAAGGTGGGTTGGATGCAGTTGAGTCTCAGAGAGTGGTTGATCTTCTTAACAGAGAGTTGGCTATGTTGCTCAAGCTTAAGCCCCGAGATTTCTGGCGACAAGTGGCTGCAGATGCTTCCTTGCATGAATTTCTTGATAGCTTCTTGAAATTTAGGAGTAGATGGTATGATTTCCCTTATCATGGAACCAAGGGAGTAGTTGCTGGTGTTATTGTTGGTGACCTAGAGCTGAGCCGCCGTGTTTTCATGGTATTGTATCGGATATCGTCTAATAGAGATCCAGGTGTTCCTGCTTCTGACAGTCTCAGTCAAAAGGATCATGAAGCCCTTCTGCAGGAAAAGAAATTGCTTGACTTGCCCAAGTTGTTGGATATATGCGCAGTATATGGTCATGAAAATGAGGATTTGACAAGAGTACTGATTTTGAATGCTATACATGCTCAGCCATGGATCCACAGAAGACTAACTTCCATGATATCTCATTTCTTGGGCATAGTTCAGACTATGTATCAACGTTGCAGTTCATCTTTAGAGGCATTGATTTCTGCTGGTGGCTTTGGAGACCATGGATCCGGTCGTCGGCATTTAGAATACTTAGAGGTAATGGATTTCTTAAATGATGCTGTTGTGTCCATGGACACATTTGTGAGTGCGTACAGACCTGCAGCTATTTTCTTCTCTTGCCCTGTTGATGCTAGTCATGGAAATGAGGAGATGATCAATGTACTTGCAATGCTACATGATTCATTAATACCATCTTTACAACAGGGGCTCCATATCATTTTAGCAGCTGGGGACAAAACCTCCTCCATGCTTTCTGATGTTTCTGTGAGTTTGAGAATTTTATCTGCACGAATAGTGGACTTGGGTTGGAAATTATTGGAAAACTGTTACTTAAGTGATGAGTTATTCAAAGATCACCTTCCCTTCCTTGCTGAAATGAAAATGTTTCCTGCTAGTGTCGAGGATCCTGTAATAAGGGCTGACATATTGGTTCAGATATTTAAGGAAATTGCTGCAGTTCCTCAGCATGCTCAGGTCAAACATTACCGGGGTACCTATCTTCAAAATATTGACAAGAAGTACCAAATTATGCTGCAAATTCAGAGCCTGCAACATAGTGGATGGATTCACATAGATGATGAGCAGCACCAATACTTGGCTGGTATGATGACACATCCTGTGATCACTATTTCTAACAAGTCAGCGACCGTTGTGAACTCTGTCAGAAGTGATGGATTGCAAAAGGAGGAAGAGGCAGCAATTGCACAATCAAAGATCAGTCAAGTGAAAGATCTTTTCCCTGATTATGGAAATGGTTTTATATCAGCGTGTCTAGAAGTATACAACCATAATCCAGAGGAGGTGATCCAAAGGATTTTGGAAGGAACTTTGCATGAAGATCTGCAGGTCCTGGACACGTCAATGGAAACTGCCCCGCCCAAGTCGACTCCATCACTGACCGAGAAGGATAAGGGAAAAGGGAAACTAGTGGAATCCACAGCACCCTCCACTACAAATGCAATTCTGTTGCCTCAAAAACCAAGGCCTGAAATCATTACTACATCCTCATCACAGTCTTCTTTGCCATCGTCAGGTGGAAGATTTGTCAGAAAATCTAATGATGCCCAAGCTGATGATGTCACTCTTTATTCTAGAGATGATAAGCCCATGGAGAAGACAGCTTTGTTGCTATCACAATACGAATACGAAGACGAATATGATGACTCTTTTGATGACCTGGGAATGACGATTGTGGAATCAGGGGTGGAGGAGACGGAGATTTTAGGTGAGAGAATCCGCTCAAGTATGAGCATATCTTCACAATCTGAAGGCCAAAGTACTGCTCCTAGTGCTAGTAGCTCTAAATGGAACTCAAGAAAGAAGCCTCAATATTATGTCAAGGATGGGAAGAATTACAGTTACAAAGTTGAAGGTGCTATTGCAGTTGCTGATCAGAAGCAGGCATCTTTAGTCAATCAAGCTCAGAAAGAACTTATACATGGACTTGGGCGTGGTGGGAACAGTCCTCTGGGTGCGATCAAGCAACTAGAAGATCAAAATGAAGCCGAAGGAGATGAGGCTGAGCCATTGGAGGTAGATGGTGGCGGTAATGGTGGGAGGGGAAGGGGGAGGGGCCGAGGAAGGAGAGGCAGTGGAGGAAGAAATCATTACAGGAAGGATCGAGCCATGAAGAAACACATGGCTGGCGTGGGTGGATTTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_79018.p1 GENE.S_Transcript_79018~~S_Transcript_79018.p1 ORF type:complete len:854 (+),score=190.03,CUE|PF02845.12|6.1e-10 S_Transcript_79018:147-2708(+)
MSNRSASYRQETNSRGFRGKTQKKFVPKNPPISSLPNTTTTANPTLSASLRQSISGLPSTSGSGSGSGRQSRVRLGDNGEWVSSKTQSGGGGGNFVNYLPQDEAVAVGLSAEEGGLDAVESQRVVDLLNRELAMLLKLKPRDFWRQVAADASLHEFLDSFLKFRSRWYDFPYHGTKGVVAGVIVGDLELSRRVFMVLYRISSNRDPGVPASDSLSQKDHEALLQEKKLLDLPKLLDICAVYGHENEDLTRVLILNAIHAQPWIHRRLTSMISHFLGIVQTMYQRCSSSLEALISAGGFGDHGSGRRHLEYLEVMDFLNDAVVSMDTFVSAYRPAAIFFSCPVDASHGNEEMINVLAMLHDSLIPSLQQGLHIILAAGDKTSSMLSDVSVSLRILSARIVDLGWKLLENCYLSDELFKDHLPFLAEMKMFPASVEDPVIRADILVQIFKEIAAVPQHAQVKHYRGTYLQNIDKKYQIMLQIQSLQHSGWIHIDDEQHQYLAGMMTHPVITISNKSATVVNSVRSDGLQKEEEAAIAQSKISQVKDLFPDYGNGFISACLEVYNHNPEEVIQRILEGTLHEDLQVLDTSMETAPPKSTPSLTEKDKGKGKLVESTAPSTTNAILLPQKPRPEIITTSSSQSSLPSSGGRFVRKSNDAQADDVTLYSRDDKPMEKTALLLSQYEYEDEYDDSFDDLGMTIVESGVEETEILGERIRSSMSISSQSEGQSTAPSASSSKWNSRKKPQYYVKDGKNYSYKVEGAIAVADQKQASLVNQAQKELIHGLGRGGNSPLGAIKQLEDQNEAEGDEAEPLEVDGGGNGGRGRGRGRGRRGSGGRNHYRKDRAMKKHMAGVGGF*

Click here to download the sequence:
Link to NCBI Protein BLAST