Transcript Information: S_Transcript_79022.p1


Annotated TAIR IDAT1G11290.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)CRR22
Annotation TypeOrtholog
Chromosome Positionchr1:3791454-3793883 | Reverse length=809
E-Value3E-17
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.5449591345118
Replicate 24.7019059712736
Replicate 34.7870489834482
Condition 2: 8 Hour
Replicate 16.991931251519
Replicate 26.2959027592673
Replicate 38.4448030129024
Condition 3: 24 Hour
Replicate 13.700499389117
Replicate 23.5296099995951
Replicate 33.4456344815732


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_79022.p1 GENE.S_Transcript_79022~~S_Transcript_79022.p1 ORF type:3prime_partial len:366 (+),score=66.76,PPR_2|PF13041.2|0.16,PPR_2|PF13041.2|2e-06,PPR_2|PF13041.2|1.5,PPR_2|PF13041.2|6.9e-12,PPR_2|PF13041.2|3e-06,PPR_2|PF13041.2|1.6e-08,PPR|PF01535.16|0.026,PPR|PF01535.16|5e-05,PPR|PF01535.16|0.22,PPR|PF01535.16|1.7e-11,PPR|PF01535.16|60,PPR|PF01535.16|7.4e-06,PPR|PF01535.16|5e-06,PPR_1|PF12854.3|94,PPR_1|PF12854.3|0.0086,PPR_1|PF12854.3|45,PPR_1|PF12854.3|4e-06,PPR_1|PF12854.3|1.1e-05,PPR_1|PF12854.3|0.0016,PPR_3|PF13812.2|7.4e+02,PPR_3|PF13812.2|3.7,PPR_3|PF13812.2|12,PPR_3|PF13812.2|3.3e-08,PPR_3|PF13812.2|1e+03,PPR_3|PF13812.2|0.57,PPR_3|PF13812.2|0.0001 S_Transcript_79022:366-1460(+)
ATGGCTTTTACAAAGAACACCTCTTTCAAACCAAACTTGTCAGTTTGTTCTGCAAATTCAACAGCTTGGATGATGCAGCTCGTGTTTTTGACCCCATTGAGGATAAGATTGATGCCCTTTATCACACCATGCTTAAAGGACCTTAGGAGGGGTAAGGAGATTCACAGTCAACTTATTCTTAATGGGTTTTCGTCGAATTTGTTTGCTATGACTGGGGTCATGAACATGTATGCAAAATGTAGGGAGTTAGGCGATGCATATAAGATGTTTGTTAGAATGCCTGAGAGAGATGTGCCTTCTTGGAATGCTATCATTGCTGGGTATGCTCAAAATGGGTTTGCTAAGATTGCTTTGGAGTTGCTTGTTACGATGCAGGAAGAAGGAAGAAGGCCGGATTGGATCACTGTGATCGCGGCTCTCCCTGCTTCGGCTGATATGGGGTCTCTTTGTTTAGGCAAAGCTATTCATGGGTATGTTATGAGAATTGGGTTTGATATGCATGTGAATGTTTTGACTGCATTGGTTGATATGTATGGCAAGTGTCGAGCAGTGGACATTGCTAGGTTGATTTTCGATAGAATGGAGTCTCGGACTGTTGTTACTTGGAATTCTATGATTGATGGTTATGTTCAAAGTGGGAATCCTGAGGAAGCGTTGACGCTTTTTCAGAGAATGTTGGATGAAGGAATCGAACCGAGTGATGTATCTATCATGGAAGCTCTGCATGCTTGTGCTGCCTTCGGGGATATGGAGAAGGGTATGAGCATTCACAAATTGTCTGATCAACTGGGGCTTGGCTCCAATGTATCTGTTACAAATTCCTTAATTTCCATGTATTGCAAATGTAAGAGGGTTGATGAAGCTGTGAAATTGTTTAGTAACTTGAAAAGTAAAACTCGGGTGTCCTGGAATGCACTCATCCTTGGTTTTGCACAGAGTGGTCGCATAAATGTGGCTTTGAATTACTTCTCTGAGATGCAATTGAATGGCATACAATTGGATTCGTTCACTTTGGTGAGTGTGATTCCTGCTTTGGCTGAATTATCCATTTTACGACAAGCAAAATGGATCCATGGACTAGCAATAAGGACTTGC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_79022.p1 GENE.S_Transcript_79022~~S_Transcript_79022.p1 ORF type:3prime_partial len:366 (+),score=66.76,PPR_2|PF13041.2|0.16,PPR_2|PF13041.2|2e-06,PPR_2|PF13041.2|1.5,PPR_2|PF13041.2|6.9e-12,PPR_2|PF13041.2|3e-06,PPR_2|PF13041.2|1.6e-08,PPR|PF01535.16|0.026,PPR|PF01535.16|5e-05,PPR|PF01535.16|0.22,PPR|PF01535.16|1.7e-11,PPR|PF01535.16|60,PPR|PF01535.16|7.4e-06,PPR|PF01535.16|5e-06,PPR_1|PF12854.3|94,PPR_1|PF12854.3|0.0086,PPR_1|PF12854.3|45,PPR_1|PF12854.3|4e-06,PPR_1|PF12854.3|1.1e-05,PPR_1|PF12854.3|0.0016,PPR_3|PF13812.2|7.4e+02,PPR_3|PF13812.2|3.7,PPR_3|PF13812.2|12,PPR_3|PF13812.2|3.3e-08,PPR_3|PF13812.2|1e+03,PPR_3|PF13812.2|0.57,PPR_3|PF13812.2|0.0001 S_Transcript_79022:366-1460(+)
MAFTKNTSFKPNLSVCSANSTAWMMQLVFLTPLRIRLMPFITPCLKDLRRGKEIHSQLILNGFSSNLFAMTGVMNMYAKCRELGDAYKMFVRMPERDVPSWNAIIAGYAQNGFAKIALELLVTMQEEGRRPDWITVIAALPASADMGSLCLGKAIHGYVMRIGFDMHVNVLTALVDMYGKCRAVDIARLIFDRMESRTVVTWNSMIDGYVQSGNPEEALTLFQRMLDEGIEPSDVSIMEALHACAAFGDMEKGMSIHKLSDQLGLGSNVSVTNSLISMYCKCKRVDEAVKLFSNLKSKTRVSWNALILGFAQSGRINVALNYFSEMQLNGIQLDSFTLVSVIPALAELSILRQAKWIHGLAIRTC

Click here to download the sequence:
Link to NCBI Protein BLAST