Transcript Information: S_Transcript_79028.p1


Annotated TAIR IDAT5G18440.1
Annotated Gene NameCONTAINS InterPro DOMAIN/s: Nuclear fragile X mental retardation-interacting protein 1, conserved region (InterPro:IPR019496); Has 1333 Blast hits to 1211 proteins in 205 species: Archae - 0; Bacteria - 137; Metazoa - 339; Fungi - 162; Plants - 70; Viruses - 6; Other Eukaryotes - 619 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:6113092-6115748 | Forward length=470
E-Value6.5E-54
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 110.166256838566
Replicate 210.787917474642
Replicate 310.145070443271
Condition 2: 8 Hour
Replicate 110.753210397604
Replicate 211.318863997688
Replicate 39.5541320334721
Condition 3: 24 Hour
Replicate 19.4203742047724
Replicate 28.7346098944497
Replicate 36.7230237208883


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_79028.p1 GENE.S_Transcript_79028~~S_Transcript_79028.p1 ORF type:5prime_partial len:589 (+),score=122.48,NUFIP1|PF10453.5|1.8e+03,NUFIP1|PF10453.5|6.1e-12 S_Transcript_79028:2-1768(+)
AAACCCCCAGCTGTTAGTAAAATCCTCCCCCAAACTTGCTTCACTGAACCAGAGAGAAAACAAATCACAGAAAGGAGACAAGAAAAAGAGACCAAAGAACAAGAACAAGTACAAGCTTGGCTTACAATGGTACCTGGAAATCCAAACAACAACATGTTGCCAGACCTTATGCATATCAATAACCCTCAGTCTCAGATGGGTTTTGTTAACCCACAACAAATACAACCATCAATGCCCTTTAACAATAATTCCAATGATACCTCCCATATGGGCAACCCTTATAGACCACCCCCTGGTCCTGTGAATGCTCCTCCTCTTTTGTTGGGTTCAGCTCCACAATTTGTTCAGGGTTTAAATGTTTCTGCCTTTCCCTTTAATGGGCAGTTGCCAAATTTTAGTCAAGGTAATCAGGCTCAGTTGTTTGGGCATAATAATAATAATAATATTCCATTGAACATGGGTCAGCCTTTTAACCAGGTTGGGTTACAGAATATGAATATGAATTCACACCAGTATGGGAACTTGCAGCCATTATTGAATTTGAATCCTACCCAAGTCGCAGTGTTGGCACAATTGATGGGGTGTGCTAACCAAGTAGTAGCTCAGGCTATGGTCCCTCAGAATACCGCGTTTGTCGGAAACACCCCACAGCTTGGTCTTGTCCAACCTAATAATGTCATGAGGCCACAGCTGCCTGTAGCTTCTCAACAGATGATGCAGAATTTTTCTCCTACTCAATGTAATCCTGCCTCGTCGAGCCCACATCATAGTCAGTCCCCGGGTATGCAGGGAAATCCAGGTAAAATACATGGGATGCAAGATTCATATCAACACCGAAATAACAACTTTATGAAGAGGCCCCAAAGAGATACATCTAATCAGAGGTTCCAAAAGTCTCAACATCATCATACGCATAATACGAAAAGAAACCACAAGATTCCTGACAAAAATGGAGGCAAAGGCCATAAAGGTCTCGATCCTGATAATAGTGCCAACCTGTCCAAGAGTGGAAAGAGAAGGTCGCTCGCTGCATTTTACACTGAGAAAGAAATCCAGCTGTGGCGTGAAGAGCGCAAGAAGAATTTCCCATCGAAATCCAATGTGGAAAAGAGGCTGGCAGAGAAGCAAGCAAATGCGGATGCTGCGGTTGAAGAGGCCAAGTTACGGCGTCTGCAACTCAAGGATGTATTGGCAAAACAAGCTGAATTGGGTTTTGAAGTTCCCGAAATTCCGTCACACTATTTAATGGATGCAGAAGACTTGCCCCATGGTAAGGACGGGAACAGAAAGCCATTCAACAGTGGGCGATTCCAGAAAAAGACTAATAAAAGGGGAAAATTTGACAAAAACAACTGTTTTGATAAGAAAAGAGGACCTGAAGGCGATGGTTCATCGAGGAGAAATGAGCGGTTTACAAAAAGAAAAAGGGTGGAGGAGGGTGTTGAATCATCAGCGAATCCTCCGAGGATAAAGAAGCCAACACTTCTTCAAAAGCTTTTGAGCCCGGATATAAAAAGAGATGAGCTTCGCCTGTTGCAGGCACTTCGCTTCATGGTGATGAATTCTTTCTTCAAAGATTGGCCTGAGAAGGCTTTGGACTTCCCCAAGGTTATCGTCAAGGAAACTGAAGTCGGGAGTGAGGTGATCGAACCAAAACCCTTCTCTTCAGACAGACAACCTGCTGGTAGCATCGAGGATCACGACACTTCTGATGACAGTCATGGCGAGAATGATGGCTGTCAAGAAGAGGGAGAAATAACAGACTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_79028.p1 GENE.S_Transcript_79028~~S_Transcript_79028.p1 ORF type:5prime_partial len:589 (+),score=122.48,NUFIP1|PF10453.5|1.8e+03,NUFIP1|PF10453.5|6.1e-12 S_Transcript_79028:2-1768(+)
KPPAVSKILPQTCFTEPERKQITERRQEKETKEQEQVQAWLTMVPGNPNNNMLPDLMHINNPQSQMGFVNPQQIQPSMPFNNNSNDTSHMGNPYRPPPGPVNAPPLLLGSAPQFVQGLNVSAFPFNGQLPNFSQGNQAQLFGHNNNNNIPLNMGQPFNQVGLQNMNMNSHQYGNLQPLLNLNPTQVAVLAQLMGCANQVVAQAMVPQNTAFVGNTPQLGLVQPNNVMRPQLPVASQQMMQNFSPTQCNPASSSPHHSQSPGMQGNPGKIHGMQDSYQHRNNNFMKRPQRDTSNQRFQKSQHHHTHNTKRNHKIPDKNGGKGHKGLDPDNSANLSKSGKRRSLAAFYTEKEIQLWREERKKNFPSKSNVEKRLAEKQANADAAVEEAKLRRLQLKDVLAKQAELGFEVPEIPSHYLMDAEDLPHGKDGNRKPFNSGRFQKKTNKRGKFDKNNCFDKKRGPEGDGSSRRNERFTKRKRVEEGVESSANPPRIKKPTLLQKLLSPDIKRDELRLLQALRFMVMNSFFKDWPEKALDFPKVIVKETEVGSEVIEPKPFSSDRQPAGSIEDHDTSDDSHGENDGCQEEGEITD*

Click here to download the sequence:
Link to NCBI Protein BLAST