Transcript Information: S_Transcript_79045.p1


Annotated TAIR IDAT1G27460.1
Annotated Gene Nameno pollen germination related 1
Annotated Gene Symbol(s)NPGR1
Annotation TypeOrtholog
Chromosome Positionchr1:9534977-9537424 | Forward length=694
E-Value2.1E-263
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 17.9209767236838
Replicate 26.7200986273933
Replicate 35.3353116903879
Condition 2: 8 Hour
Replicate 14.2413502299722
Replicate 25.787432332391
Replicate 36.3443551981447
Condition 3: 24 Hour
Replicate 14.9826994331814
Replicate 26.2096952441452
Replicate 35.6126941652553


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_79045.p1 GENE.S_Transcript_79045~~S_Transcript_79045.p1 ORF type:complete len:719 (+),score=157.37,TPR_1|PF00515.24|0.81,TPR_1|PF00515.24|2.7e+02,TPR_1|PF00515.24|85,TPR_1|PF00515.24|71,TPR_1|PF00515.24|4.7e+02,TPR_1|PF00515.24|12,TPR_1|PF00515.24|1.6e+02,TPR_1|PF00515.24|3.4e+02,TPR_1|PF00515.24|1.2e+02,TPR_1|PF00515.24|5.9e+03,TPR_1|PF00515.24|0.02,TPR_11|PF13414.2|1.8,TPR_11|PF13414.2|5.7e+03,TPR_11|PF13414.2|47,TPR_11|PF13414.2|88,TPR_11|PF13414.2|1.5e+04,TPR_11|PF13414.2|13,TPR_11|PF13414.2|0.038,TPR_16|PF13432.2|0.0026,TPR_16|PF13432.2|2.2e+03,TPR_16|PF13432.2|1.8e+03,TPR_16|PF13432.2|3.1,TPR_16|PF13432.2|1.4e+03,TPR_16|PF13432.2|9.5,TPR_16|PF13432.2|2.7e+03,TPR_16|PF13432.2|6e+03,TPR_16|PF13432.2|29,TPR_14|PF13428.2|1.7,TPR_14|PF13428.2|5.1e+02,TPR_14|PF13428.2|1.2e+04,TPR_14|PF13428.2|7.1e+02,TPR_14|PF13428.2|1.8e+02,TPR_14|PF13428.2|2.1,TPR_14|PF13428.2|6.4e+02,TPR_14|PF13428.2|5.4e+02,TPR_14|PF13428.2|83,TPR_2|PF07719.13|0.35,TPR_2|PF07719.13|4.2e+03,TPR_2|PF07719.13|9.6e+02,TPR_2|PF07719.13|40,TPR_2|PF07719.13|4.3,TPR_2|PF07719.13|2.9e+03,TPR_2|PF07719.13|6.8e+03,TPR_2|PF07719.13|92,TPR_2|PF07719.13|1.9e+03,TPR_2|PF07719.13|2.2e+02,TPR_2|PF07719.13|53,TPR_2|PF07719.13|1e+04,TPR_2|PF07719.13|0.49,TPR_19|PF14559.2|0.034,TPR_19|PF14559.2|2.5e+02,TPR_19|PF14559.2|1e+04,TPR_19|PF14559.2|81,TPR_19|PF14559.2|10,TPR_19|PF14559.2|6.3e+03,TPR_19|PF14559.2|2.1e+02,TPR_19|PF14559.2|11,TPR_12|PF13424.2|0.86,TPR_12|PF13424.2|1.1e+03,TPR_12|PF13424.2|1.9e+03,TPR_12|PF13424.2|45,TPR_12|PF13424.2|1.8e+03,TPR_12|PF13424.2|0.37,TPR_12|PF13424.2|3e+02,TPR_12|PF13424.2|7.6e+02,TPR_12|PF13424.2|1.3e+02 S_Transcript_79045:459-2615(+)
ATGTTGTGTGCTTGCTCAGGAGAGCAGTTCAGATTCGAAGAACCGGCACCCAGATCACCGGAATCATTGGCAACAAGGGACTTCTCGGCGAGTGGAATATCGTCGAGGACCGGAGATTTGAAGAGCATTTCTTCAAGGACTGCTGGTGATTTGGCGTCCAAATACGAGGATGCTCATGTTGATGAAGTTGAATCCACGTTGAAGGAAGCTCTTTCGTTAAATTACGAGGAAGCAAGAGCTCTACTGGGAAGGATAGAGTACCAGAAGGGGAATTACGATGCCGCCCTCCAGCTTTTTCAAGGGATTGACATCAGGGGATTATCTGCAAGGATAACTACTGCCATTTCTGAGCGCACTTGGCCAAGGAAGCCACGATCCAAGGCCGATAATTCACTTGCTGGTGTAATGTCTTGGCATTCAGTGAGTCTGCTTCTTGAAGCAATTCTACTCAAGGCTAAGGTCTTGGAGGAACTCGGGAGAATTACGGAGGGCGCAAAGGAGTGCAAACTGATTATAGACATAGTCGAATCAGCATTACCTAATGGGATGCCAGCAAGAATTAGTCAAGATAACAAGATGCAGGAGATGTTTCACAAGGCACTAGAGCTGCTTCCTAAGCTATGGAAAGATGCAGGGTGCCTTGATGAAGCTGTCATTGCATATCGCCGAGCTCTTGTGAAGCCCTGGAATCTGGATCCTCAGAGATTAGCTTGTGTTCAGAAGGATTTAGCTTCCATATTGCTTTACGGTGGTGTTGAAACGGAGCTTCCTCGACAACTCCAAATATTGGGCCCAATTACGCCTAAGAATAATCTCGAGGAAGCAATCCTTTTGCTCTTTGTGCTTGTTAGTAAAGCAGCAAGCAAGGAAATTAAGTGGGACCCAGACATCATAGATCATCTCTCTTTTGCACTCTCAATGTGTGGAGGGTTTGAGTTTCTTGCTCATCATGTGGAGGAAGTCCTTCCCGGAATCTATAACAGAGCTGAAAGATGGTACATTCTTGCGCTTTGTTACTATGCTGCTGAGCAGAATGATGTGGCTTTAGATCTAGTTAGAAAAATTTCGGGACACTCCGAGTCCAAGCACAAACCCGACATCCCTTCTCTTTTACTAGGAGCAAAGCTATGTGCAAATGATCCAAAGCTTGCTCGGGAAGGAATAAATTATTCTCACAAGGTTGTCGATTTGGCTGCTGATGGGAACAACCATTTTATGGCTCAAGCACATAAGTTTCTGGGAATGTGCTATGCTAATGCTGCTAGAGTATCTATATCAAATTCAGAGAGGGAGATATTTAGGAAGGAGACTTTCAAGCACCTAAAGACCGCTGCTTCAGTTGAGGAGGATCCTGAGTTGATGTTCAACCTGGGTATGGAAAATGCCATACAAAGGAACCTGGATGCTGGTTTTGGCTATACAAAACTGTCATCCAACATGGTTGCTGGGAGCTCTGTAAGAGGATGGAAGCTATTGGCTTTGATAGCTTCTGCACAGCAGCAGTTTGATAATGCTGAAGACATAATCGATATTGCTTTGGATGAAACCACTGGGATGGATCATTTAAAACTTCTGAGGTTAAAGGCTGTCATTCAGATCGCTCAAGAAAACCCCAAGCAAGCTATAGTGAATTATGTAGTTTTGTTGGCACAAATTCAAGCAGCAAAGCAACAGAAAATCGAAAATTCCTGTCTCAAGGCAACAGAAATGAAGAATTTGGAAATGGAAGCTTGGCAAGATTTGGCCAACTTGTACACAGGGCTTGAATCATGGGGTGATGCTGAGATCTGCGTGAAAAAGTCCAAGTTAATTGACTTTTATAGCCCTCAAAGTTGGCATGCAGCAGGTATACTACTGAAGGCCCAATCTCTATTCAGTGAAGCGCTAGTTGCTTTCTCGGTCTCACTGTCAATAGAGCCAAATCAGATCCCGAGTTTAGTTTCAGCCGCAGAAATTTTGATGGAACTTGGTGGCTCTTCTCTCCCTATAGCCAAAAGCTTCTTAATGATTGCTCTCCAGTTAGAGCCGACAAATTATGATGCCTGGTTGAGCCTTGGATTTATTTTAAAGAAGGAAGGTTTATCATCACAAGCTGCAGATTGTTTCCAAGCTGCATGTGAATTGAAGTCCACAGCACCAGTTCAACCATTTGTATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_79045.p1 GENE.S_Transcript_79045~~S_Transcript_79045.p1 ORF type:complete len:719 (+),score=157.37,TPR_1|PF00515.24|0.81,TPR_1|PF00515.24|2.7e+02,TPR_1|PF00515.24|85,TPR_1|PF00515.24|71,TPR_1|PF00515.24|4.7e+02,TPR_1|PF00515.24|12,TPR_1|PF00515.24|1.6e+02,TPR_1|PF00515.24|3.4e+02,TPR_1|PF00515.24|1.2e+02,TPR_1|PF00515.24|5.9e+03,TPR_1|PF00515.24|0.02,TPR_11|PF13414.2|1.8,TPR_11|PF13414.2|5.7e+03,TPR_11|PF13414.2|47,TPR_11|PF13414.2|88,TPR_11|PF13414.2|1.5e+04,TPR_11|PF13414.2|13,TPR_11|PF13414.2|0.038,TPR_16|PF13432.2|0.0026,TPR_16|PF13432.2|2.2e+03,TPR_16|PF13432.2|1.8e+03,TPR_16|PF13432.2|3.1,TPR_16|PF13432.2|1.4e+03,TPR_16|PF13432.2|9.5,TPR_16|PF13432.2|2.7e+03,TPR_16|PF13432.2|6e+03,TPR_16|PF13432.2|29,TPR_14|PF13428.2|1.7,TPR_14|PF13428.2|5.1e+02,TPR_14|PF13428.2|1.2e+04,TPR_14|PF13428.2|7.1e+02,TPR_14|PF13428.2|1.8e+02,TPR_14|PF13428.2|2.1,TPR_14|PF13428.2|6.4e+02,TPR_14|PF13428.2|5.4e+02,TPR_14|PF13428.2|83,TPR_2|PF07719.13|0.35,TPR_2|PF07719.13|4.2e+03,TPR_2|PF07719.13|9.6e+02,TPR_2|PF07719.13|40,TPR_2|PF07719.13|4.3,TPR_2|PF07719.13|2.9e+03,TPR_2|PF07719.13|6.8e+03,TPR_2|PF07719.13|92,TPR_2|PF07719.13|1.9e+03,TPR_2|PF07719.13|2.2e+02,TPR_2|PF07719.13|53,TPR_2|PF07719.13|1e+04,TPR_2|PF07719.13|0.49,TPR_19|PF14559.2|0.034,TPR_19|PF14559.2|2.5e+02,TPR_19|PF14559.2|1e+04,TPR_19|PF14559.2|81,TPR_19|PF14559.2|10,TPR_19|PF14559.2|6.3e+03,TPR_19|PF14559.2|2.1e+02,TPR_19|PF14559.2|11,TPR_12|PF13424.2|0.86,TPR_12|PF13424.2|1.1e+03,TPR_12|PF13424.2|1.9e+03,TPR_12|PF13424.2|45,TPR_12|PF13424.2|1.8e+03,TPR_12|PF13424.2|0.37,TPR_12|PF13424.2|3e+02,TPR_12|PF13424.2|7.6e+02,TPR_12|PF13424.2|1.3e+02 S_Transcript_79045:459-2615(+)
MLCACSGEQFRFEEPAPRSPESLATRDFSASGISSRTGDLKSISSRTAGDLASKYEDAHVDEVESTLKEALSLNYEEARALLGRIEYQKGNYDAALQLFQGIDIRGLSARITTAISERTWPRKPRSKADNSLAGVMSWHSVSLLLEAILLKAKVLEELGRITEGAKECKLIIDIVESALPNGMPARISQDNKMQEMFHKALELLPKLWKDAGCLDEAVIAYRRALVKPWNLDPQRLACVQKDLASILLYGGVETELPRQLQILGPITPKNNLEEAILLLFVLVSKAASKEIKWDPDIIDHLSFALSMCGGFEFLAHHVEEVLPGIYNRAERWYILALCYYAAEQNDVALDLVRKISGHSESKHKPDIPSLLLGAKLCANDPKLAREGINYSHKVVDLAADGNNHFMAQAHKFLGMCYANAARVSISNSEREIFRKETFKHLKTAASVEEDPELMFNLGMENAIQRNLDAGFGYTKLSSNMVAGSSVRGWKLLALIASAQQQFDNAEDIIDIALDETTGMDHLKLLRLKAVIQIAQENPKQAIVNYVVLLAQIQAAKQQKIENSCLKATEMKNLEMEAWQDLANLYTGLESWGDAEICVKKSKLIDFYSPQSWHAAGILLKAQSLFSEALVAFSVSLSIEPNQIPSLVSAAEILMELGGSSLPIAKSFLMIALQLEPTNYDAWLSLGFILKKEGLSSQAADCFQAACELKSTAPVQPFV*

Click here to download the sequence:
Link to NCBI Protein BLAST