Transcript Information: S_Transcript_79089.p1


Annotated TAIR IDAT3G52580.1
Annotated Gene NameRibosomal protein S11 family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:19503324-19504701 | Forward length=150
E-Value4.5E-100
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 1632.55873456105
Replicate 2478.11212746314
Replicate 3495.60855521768
Condition 2: 8 Hour
Replicate 1481.36213403702
Replicate 2469.93813847842
Replicate 3457.61305205145
Condition 3: 24 Hour
Replicate 1348.12915481831
Replicate 2384.36776395956
Replicate 3374.83165413615


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_79089.p1 GENE.S_Transcript_79089~~S_Transcript_79089.p1 ORF type:5prime_partial len:173 (+),score=33.50,Ribosomal_S11|PF00411.15|2.5e-47 S_Transcript_79089:3-521(+)
TCCATTCTCTCTTCCACAAACCCCCCGCCCCTCCTTACCTGCCGCAAAACCCCCTCAAGCTCCACAATGTCTAGGAGAAAGACAAGAGAGCCCAAGGAAGAGAATATCACCCTTGGCCCTGCTGTTAGGGAAGGCGAGCATGTTTTTGGTGTTGCCCACATCTTTGCCTCTTTTAATGACACCTTCATTCACGTAACCGATTTGTCTGGCCGTGAAACCATGGTTCGCATTACTGGTGGGATGAAGGTCAAGGCAGATAGGGATGAGTCTTCACCATACGCTGCTATGCTTGCAGCACAAGATGTGTCACAAAGATGCAAGGAACTCGGTATAACTGCTCTTCACATCAAGCTCCGTGCTACTGGTGGTAACAAGACTAAGACACCTGGTCCCGGTGCTCAGTCTGCACTCCGTGCCCTTGCCCGTTCTGGCATGAAAATTGGCCGTATTGAGGATGTTACACCAATTCCTACAGACAGTACCCGAAGAAAGAGTGGACGTAGGGGTAGAAGGTTGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_79089.p1 GENE.S_Transcript_79089~~S_Transcript_79089.p1 ORF type:5prime_partial len:173 (+),score=33.50,Ribosomal_S11|PF00411.15|2.5e-47 S_Transcript_79089:3-521(+)
SILSSTNPPPLLTCRKTPSSSTMSRRKTREPKEENITLGPAVREGEHVFGVAHIFASFNDTFIHVTDLSGRETMVRITGGMKVKADRDESSPYAAMLAAQDVSQRCKELGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGRIEDVTPIPTDSTRRKSGRRGRRL*

Click here to download the sequence:
Link to NCBI Protein BLAST