Transcript Information: S_Transcript_79142.p1


Annotated TAIR IDAT5G48470.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:19641810-19644127 | Forward length=397
E-Value9.9E-100
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 17.7263551973105
Replicate 210.319691889805
Replicate 312.344734636604
Condition 2: 8 Hour
Replicate 119.892232365713
Replicate 219.785855382984
Replicate 319.997932296071
Condition 3: 24 Hour
Replicate 18.4560839318429
Replicate 212.733162955529
Replicate 314.984064014867


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_79142.p1 GENE.S_Transcript_79142~~S_Transcript_79142.p1 ORF type:complete len:372 (+),score=82.97 S_Transcript_79142:88-1116(+)
ATGGCATGCGCGCCAATTACATCCCCAAATTCTCTCTCCTCACCCTCAGCACTCTTACCATCACCAATTCCCTGCATACAATTTCGCACCCATTTCACCCAACTCAGCAAATTTTCTGTAAAGGGAAGAAGGTCACGTTTCCTATCCCTGTGTACTAGCTATGAAGTGGGTGGTGGGTACCCAGAATCTGATTTTGCAACTAAAGAAGCAAAATCAGATACCCAAGATCAATTCAACCAGAAATTGGACACCTCTGAGCGTGAAGCTCTCCTTAAGGGTGGAGAACAGGTTACTTCTGTTCTTCAGGAGATGATTACTCTTCTAGAGGATATGAACATGGATGAAGCTTCTGAGGAAGTTGCCGTGCAGTTGGCTGCGCAAGGGGTTATTGGCAAGAGAGTTGATCAAATGGAGGCAGGATTCATGATGGCTCTGGATTACATGATTCAAACAGCTGAAAATGACAATGATGATCAGCGCAAGTCACTGTTGGAGGTCATCAAGGAGACAGTATTATCACATCTCACAAAGAAATGCCCCCCACATGTCCAAGTAATTGGATTGCTTTGTAGAACTCCAAATAAGGAGAGCAGACATGAACTGCTGCGTCGAGTGGCTGCTGGAGGTGGAGAATTTAAGGGTGAAAATGGCACAAAAGTTCATCTTCCAGGTGCAAATCTGCTTGATATTGCCAACCAGGCTGATGATTTGTTGGAGGTGAATTTTTTGACCAAGCTAGTCGCCTTGAAACCTGGTAAGACAGCCCAGGAGATGATTAAAAATGTAATGCAAGGCAAGGATGAAGGTGCAGACAATGAGGAAAACAGAACTGGTGGTTCTCGTGGAGTTATAGGGAGAGAAAGTTTGACTGGGCGTAAACCCCTTCCAGTGCGCCCAGGGATGTTTCTCGAGACAGTATCAAAGGTATTGGGGGGTATCTATGCAGGAAATGTGTCAGGCATTACCGCTCAACATTTAGAATGGGTGCACCAAAAGACACTTCAAGTTCTTGAGGAGATAGCATTTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_79142.p1 GENE.S_Transcript_79142~~S_Transcript_79142.p1 ORF type:complete len:372 (+),score=82.97 S_Transcript_79142:88-1116(+)
MACAPITSPNSLSSPSALLPSPIPCIQFRTHFTQLSKFSVKGRRSRFLSLCTSYEVGGGYPESDFATKEAKSDTQDQFNQKLDTSEREALLKGGEQVTSVLQEMITLLEDMNMDEASEEVAVQLAAQGVIGKRVDQMEAGFMMALDYMIQTAENDNDDQRKSLLEVIKETVLSHLTKKCPPHVQVIGLLCRTPNKESRHELLRRVAAGGGEFKGENGTKVHLPGANLLDIANQADDLLEVNFLTKLVALKPGKTAQEMIKNVMQGKDEGADNEENRTGGSRGVIGRESLTGRKPLPVRPGMFLETVSKVLGGIYAGNVSGITAQHLEWVHQKTLQVLEEIAF*

Click here to download the sequence:
Link to NCBI Protein BLAST