Transcript Information: S_Transcript_79143.p1


Annotated TAIR IDAT5G48470.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:19641810-19644127 | Forward length=397
E-Value2.9E-195
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 120.593393812937
Replicate 221.327363238931
Replicate 321.340880325309
Condition 2: 8 Hour
Replicate 126.961386329518
Replicate 233.397974040735
Replicate 331.009483063437
Condition 3: 24 Hour
Replicate 118.724185849081
Replicate 220.451391874847
Replicate 321.078422824276


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_79143.p1 GENE.S_Transcript_79143~~S_Transcript_79143.p1 ORF type:complete len:420 (+),score=94.73 S_Transcript_79143:88-1260(+)
ATGGCATGCGCGCCAATTACATCCCCAAATTCTCTCTCCTCACCCTCAGCACTCTTACCATCACCAATTCCCTGCATACAATTTCGCACCCATTTCACCCAACTCAGCAAATTTTCTGTAAAGGGAAGAAGGTCACGTTTCCTATCCCTGTGTACTAGCTATGAAGTGGGTGGTGGGTACCCAGAATCTGATTTTGCAACTAAAGAAGCAAAATCAGATACCCAAGATCAATTCAACCAGAAATTGGACACCTCTGAGCGTGAAGCTCTCCTTAAGGGTGGAGAACAGGTTACTTCTGTTCTTCAGGAGATGATTACTCTTCTAGAGGATATGAACATGGATGAAGCTTCTGAGGAAGTTGCCGTGCAGTTGGCTGCGCAAGGGGTTATTGGCAAGAGAGTTGATCAAATGGAGGCAGGATTCATGATGGCTCTGGATTACATGATTCAAACAGCTGAAAATGACAATGATGATCAGCGCAAGTCACTGTTGGAGGTCATCAAGGAGACAGTATTATCACATCTCACAAAGAAATGCCCCCCACATGTCCAAGTAATTGGATTGCTTTGTAGAACTCCAAATAAGGAGAGCAGACATGAACTGCTGCGTCGAGTGGCTGCTGGAGGTGGAGAATTTAAGGGTGAAAATGGCACAAAAGTTCATCTTCCAGGTGCAAATCTGCTTGATATTGCCAACCAGGCTGATGATTTGCTGGAGACAATGGAAACAAGACCGGTTGTTCCTGATAGAAAGCTGCTGGCAAGGCTTGTTTTAATCAGAGAAGAAGCTCGAAATATGCTAGGAGGAGGAATACTTGATGAAAGAAATGATCGTGGTTTTAATACCCTCCCCGAATCAGAGGTGAATTTTTTGACCAAGCTAGTCGCCTTGAAACCTGGTAAGACAGCCCAGGAGATGATTAAAAATGTAATGCAAGGCAAGGATGAAGGTGCAGACAATGAGGAAAACAGAACTGGTGGTTCTCGTGGAGTTATAGGGAGAGAAAGTTTGACTGGGCGTAAACCCCTTCCAGTGCGCCCAGGGATGTTTCTCGAGACAGTATCAAAGGTATTGGGGGGTATCTATGCAGGAAATGTGTCAGGCATTACCGCTCAACATTTAGAATGGGTGCACCAAAAGACACTTCAAGTTCTTGAGGAGATAGCATTTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_79143.p1 GENE.S_Transcript_79143~~S_Transcript_79143.p1 ORF type:complete len:420 (+),score=94.73 S_Transcript_79143:88-1260(+)
MACAPITSPNSLSSPSALLPSPIPCIQFRTHFTQLSKFSVKGRRSRFLSLCTSYEVGGGYPESDFATKEAKSDTQDQFNQKLDTSEREALLKGGEQVTSVLQEMITLLEDMNMDEASEEVAVQLAAQGVIGKRVDQMEAGFMMALDYMIQTAENDNDDQRKSLLEVIKETVLSHLTKKCPPHVQVIGLLCRTPNKESRHELLRRVAAGGGEFKGENGTKVHLPGANLLDIANQADDLLETMETRPVVPDRKLLARLVLIREEARNMLGGGILDERNDRGFNTLPESEVNFLTKLVALKPGKTAQEMIKNVMQGKDEGADNEENRTGGSRGVIGRESLTGRKPLPVRPGMFLETVSKVLGGIYAGNVSGITAQHLEWVHQKTLQVLEEIAF*

Click here to download the sequence:
Link to NCBI Protein BLAST