Transcript Information: S_Transcript_79244.p1


Annotated TAIR IDAT1G54320.1
Annotated Gene NameLEM3 (ligand-effect modulator 3) family protein / CDC50 family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:20275732-20277793 | Reverse length=349
E-Value7.8E-188
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 141.415045149849
Replicate 243.108274697392
Replicate 346.080265661331
Condition 2: 8 Hour
Replicate 168.032297063591
Replicate 262.666965065747
Replicate 364.623261326918
Condition 3: 24 Hour
Replicate 148.726051359423
Replicate 242.780393609532
Replicate 342.521314054735


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_79244.p1 GENE.S_Transcript_79244~~S_Transcript_79244.p1 ORF type:complete len:347 (+),score=38.81,CDC50|PF03381.11|2.3e-92 S_Transcript_79244:421-1461(+)
ATGAGTTCAAACGCTACATCGAGCTCGACAGCACCTGGATCAGCCGATCCCTCTTCAGCCAGAAGGAATAAACGTCCTAAGTATTCAAGGTTTACTCAACAGGAACTTCCAGCATGTAAACCTATCTTAACACCTCGATGGGTGATCTCTGCATTCATGCTTGTCAGCATTGTATTTATTCCTATTGGAGTTGCTTCTCTATTTGCGTCGCGTGATGTTGTTGAAATTGTCTACCGCTATGATGATAACTGTGTGCCAGGATCCAAGAGTGATAAGATCAAATTCATTCAGGGTTCCGCAGATAAAACCTGTATTAGGTCTCTAAATGTGTCAAAGCATATGAAGGCACCGATTTACATCTACTACCAACTTGACAACTTCTATCAGAACCATCGAAGGTATGTGAAAAGTCGTAGTGATGAGCAATTGAGGTATAACAAGAGTGCGTCTTCAGTGAGCGCATGTAAACCAGAAGATATGGCGAATGGGAAACCAATTGTTCCGTGTGGTCTGATAGCATGGAGCTTGTTCAATGACACATATAGCTTTGCCATAGGTAGCCAGAATCTTAGTGTCAACAAGAAGGATATTTCGTGGAAGAGTGATAGGGATCACAAATTTGGGAAGGATGTCTTTCCAACGAACTTTCAACAAGGAGCACTTATTGGTGGTGCTCATTTGAATGAATCAATACCTCTGAGCGAGCAAGAGGATCTCATTGTATGGATGCGAACTGCAGCTCTTCCTACTTTCAGGAAATTGTATGGTAGGATAGAGCAGGATCTGCAAGCAAACGATATCATAAAAGTAACTATGCAGAACAACTATAACACCTACAGCTTCAGTGGAAAGAAGATGCTAGTACTCTCAACCACTAGCTGGCTTGGTGGGAAAAATGATTTCCTTGGCATTGCCTATATCACTGTAGGAGGCTTGTGCTTCTTCTTGGCCATGATGTTCACTCTGATTTATCTAATCAAGCCAAGGCCACTTGGAGATCCTACTTATTTGTCCTGGAACAGAAATCCAGGAGGGCGATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_79244.p1 GENE.S_Transcript_79244~~S_Transcript_79244.p1 ORF type:complete len:347 (+),score=38.81,CDC50|PF03381.11|2.3e-92 S_Transcript_79244:421-1461(+)
MSSNATSSSTAPGSADPSSARRNKRPKYSRFTQQELPACKPILTPRWVISAFMLVSIVFIPIGVASLFASRDVVEIVYRYDDNCVPGSKSDKIKFIQGSADKTCIRSLNVSKHMKAPIYIYYQLDNFYQNHRRYVKSRSDEQLRYNKSASSVSACKPEDMANGKPIVPCGLIAWSLFNDTYSFAIGSQNLSVNKKDISWKSDRDHKFGKDVFPTNFQQGALIGGAHLNESIPLSEQEDLIVWMRTAALPTFRKLYGRIEQDLQANDIIKVTMQNNYNTYSFSGKKMLVLSTTSWLGGKNDFLGIAYITVGGLCFFLAMMFTLIYLIKPRPLGDPTYLSWNRNPGGR*

Click here to download the sequence:
Link to NCBI Protein BLAST