Transcript Information: S_Transcript_79389.p1


Annotated TAIR IDAT5G22000.2
Annotated Gene NameRING-H2 group F2A
Annotated Gene Symbol(s)RHF2A
Annotation TypeHomolog
Chromosome Positionchr5:7277436-7279553 | Forward length=375
E-Value2E-82
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 123.312708206016
Replicate 227.360187577921
Replicate 326.471895592292
Condition 2: 8 Hour
Replicate 129.146575684103
Replicate 226.68093821941
Replicate 325.927719646165
Condition 3: 24 Hour
Replicate 129.222575012483
Replicate 224.756775706089
Replicate 325.887533703404


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_79389.p1 GENE.S_Transcript_79389~~S_Transcript_79389.p1 ORF type:complete len:379 (+),score=90.16,zf-RING_2|PF13639.2|1e-10,zf-RING_2|PF13639.2|1.6e+04,zf-RING_11|PF17123.1|1.2e-08,zf-RING_11|PF17123.1|2.6e+03,zf-C3HC4|PF00097.21|3.2e-07,zf-rbx1|PF12678.3|2.5e-07,zf-rbx1|PF12678.3|1.4e+04 S_Transcript_79389:288-1424(+)
ATGGATGCTGCCAATGTTGATGATCATATGTCATCAGCTGCAGCTTTTGTTGAAGGTGGGGTGCAAGATGCTTGCGATGATGCATGCAGCATATGCCTTGAGGATTTTACTCAAAGTGATCCTTCAACGGTAACCAATTGCAAGCATGAGTTTCACCTTCAATGCATCCTAGAATGGTGCCAGAGAAGCTCAAATTGTCCGATGTGTTGGCGAGAAATTAGCCTGAAAGATGCAACTGGTCAAGAATTATTGGAGGCGGTGGAACGGGAGAGGATATCCAAAGCTAATAGATCAAGAACTCCTACAGTGTTTCATCATCCCGCCCTTGGGGAATTCGACTTGCACCATTTATCTTTGGGAGCTGGTGATGTTGACCTTGAGGAGCATATATTTCAGCACTTGGCTGCTGCTGCCGCCATGCGAAGAGGCCATCTTTCTTTTCGAAGGGAAAGCCAACGGAATAGATCATCTTCACAGGCTCGTAATCCTTTTTTTATTTTCACTGCGCCGAGTCGCTCTCACGGCATAGCTGGTTCTCCCTCTACAAGTTCTGCTGGAGGAGGAAGTGAATCACCTGCAGTTTCCCTGGGGAGTGGTTCCATGCCACTTCCAAGTAGTCCAGATGCTCGAGCACTGCCAGTTTCATTTTCACCAGCAGAAACGGATCAGCTTTCTGGCCCTAGGGCTGAATCTAATTTTGCAACTGCAAATCAGCAGAGAATATTATCAGGAACTAGAAGCTTTGCTGGTCAACCTCCCCCGGGAAGTCAAGACACAGGAGGACCATCTGACTTGCAATCACTGTCAGAATCTTTAAAATCTCGATTTAGTGCATGGTCGATGAGGTACAAAGAATCTTTTTCAAGAAATACTAGAGGTTGGAAGGAGAGGTTATTTTCTCGCAGCACTTCCATGGCTGAGGTGGGCTCAGAGGGTCAGAGAGAGGTGAATTCTGGCATTGCTAATGTTTCCCGCATGATGCATCAATTTGATGGCAGAGGAAATGATGGGGCTGGTCATACTCCTGGATCAAGTGATGGAGTCAGTAGGAACAACACAAATAATTCAGAAAATCGTGTAACTCGTATTTGTCATAGTGAGATGCCAGTTTGTGCTACGAGTTCAGCTTCAGATTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_79389.p1 GENE.S_Transcript_79389~~S_Transcript_79389.p1 ORF type:complete len:379 (+),score=90.16,zf-RING_2|PF13639.2|1e-10,zf-RING_2|PF13639.2|1.6e+04,zf-RING_11|PF17123.1|1.2e-08,zf-RING_11|PF17123.1|2.6e+03,zf-C3HC4|PF00097.21|3.2e-07,zf-rbx1|PF12678.3|2.5e-07,zf-rbx1|PF12678.3|1.4e+04 S_Transcript_79389:288-1424(+)
MDAANVDDHMSSAAAFVEGGVQDACDDACSICLEDFTQSDPSTVTNCKHEFHLQCILEWCQRSSNCPMCWREISLKDATGQELLEAVERERISKANRSRTPTVFHHPALGEFDLHHLSLGAGDVDLEEHIFQHLAAAAAMRRGHLSFRRESQRNRSSSQARNPFFIFTAPSRSHGIAGSPSTSSAGGGSESPAVSLGSGSMPLPSSPDARALPVSFSPAETDQLSGPRAESNFATANQQRILSGTRSFAGQPPPGSQDTGGPSDLQSLSESLKSRFSAWSMRYKESFSRNTRGWKERLFSRSTSMAEVGSEGQREVNSGIANVSRMMHQFDGRGNDGAGHTPGSSDGVSRNNTNNSENRVTRICHSEMPVCATSSASD*

Click here to download the sequence:
Link to NCBI Protein BLAST