Transcript Information: S_Transcript_79468.p2


Annotated TAIR IDAT1G60995.1
Annotated Gene NameFUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Membralin (InterPro:IPR019144); Has 172 Blast hits to 170 proteins in 70 species: Archae - 0; Bacteria - 0; Metazoa - 110; Fungi - 0; Plants - 38; Viruses - 0; Other Eukaryotes - 24 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:22465768-22470575 | Reverse length=623
E-Value7E-39
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.0702237183217
Replicate 25.1912446017682
Replicate 38.0280145305085
Condition 2: 8 Hour
Replicate 14.5159650083341
Replicate 29.4751358944724
Replicate 36.2693669426416
Condition 3: 24 Hour
Replicate 112.592932835754
Replicate 23.9994961605319
Replicate 37.7149782886238


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_79468.p2 GENE.S_Transcript_79468~~S_Transcript_79468.p2 ORF type:complete len:85 (+),score=9.73,Membralin|PF09746.5|2.1e-06 S_Transcript_79468:517-771(+)
ATGGATCCAGAACAGACGTTCATTAGGGTTCAAGAGAGGTTCTCGCAGGTGGTGACGCCTAGAATCAGAGCTGCTCTTGAATACTTTTATCTCTTCACCGCCATCACGTTGTTCTGTATTCTTATCGTTATGCACGCCAATTATGTTCAGCAGCCTGGTTGTTCGAGCGAGCTGTCAGGAGTTGAAACACTGAAAGCGCAACTTATTTATATTAAGAAGGGGGAAGCTGAGCTTCAAGCTATGGAAAGCTTATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_79468.p2 GENE.S_Transcript_79468~~S_Transcript_79468.p2 ORF type:complete len:85 (+),score=9.73,Membralin|PF09746.5|2.1e-06 S_Transcript_79468:517-771(+)
MDPEQTFIRVQERFSQVVTPRIRAALEYFYLFTAITLFCILIVMHANYVQQPGCSSELSGVETLKAQLIYIKKGEAELQAMESL*

Click here to download the sequence:
Link to NCBI Protein BLAST