Transcript Information: S_Transcript_79489.p1


Annotated TAIR IDAT1G48540.1
Annotated Gene NameOuter arm dynein light chain 1 protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:17945540-17950405 | Forward length=1063
E-Value1.2E-232
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 15.4324704356217
Replicate 24.8831632850921
Replicate 35.0759824083304
Condition 2: 8 Hour
Replicate 19.0730731739178
Replicate 26.8757516461545
Replicate 37.7489950582329
Condition 3: 24 Hour
Replicate 18.4924489716874
Replicate 26.3157181342344
Replicate 35.8137969328307


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_79489.p1 GENE.S_Transcript_79489~~S_Transcript_79489.p1 ORF type:complete len:872 (+),score=189.63,LRR_4|PF12799.3|6.6e+02,LRR_4|PF12799.3|4.1e+02,LRR_4|PF12799.3|8.6e-05,LRR_4|PF12799.3|2.6,LRR_4|PF12799.3|0.36,LRR_8|PF13855.2|8.3e+03,LRR_8|PF13855.2|0.02,LRR_8|PF13855.2|0.0009 S_Transcript_79489:353-2968(+)
ATGGAGATTGTGACAGGAGATCGATACCTTGAATCGCTAGTGAAATTTGTTGAGAAAAACGCGGGAAGTTTGATTGAAGGGACACTGGTGTTGAAGCTGAACCCGGTGGGGCTTCACTATGTGCAATCTAGGCTCGAAGCGCTACACGAGCTTGAGAGGCTCATTGCTGGAGCTCCAGTTGATTATCTCAGAGCTTACGTTTCCGATCTCGGCGATCACAGGGCCCTCGAACAGGTTCGGAGGATTCTGTGCCGATTGACATCGTTGAAGGTTGTGTCGGTGTTGCCACCGCCTTTGAGAGATCCTACGCCATTATCGCTGCTCGCCTTTGGGAGGTTGAAGGTGTTGGAGCTCCGTGGTTGTGATCTTTCCTCTTCTGCTGCTAAGGGGCTGCTTGAATTGAGAAATACTTTGGAGAAATTTATTTGTCACAATTCCACTGATGCACTTCGTCATGTTTTTGCTAGTAGAATCGCTGACATAAAGGAATCGCCCCATTGGAACCGATTGTCATTTGTATCTTGTGCATGTAATGGTTTGATTCTGATGGATGAGTCATTACAACTCCTTCCTGTTGTTGAAACCCTTGATCTTAGCCGCAACAAATTTGCTAAACTAGATAATCTGCGCAAATGCACAAGACTAAAGCACCTGGATCTTGGATTCAATCAACTCAGATCAATTGCGTCATTGAGTGAGCTCACGTGTCATTTATCAAAACTTGTTTTGAGGAGCAATGCGTTGAGGACATTGCGAGGGATTGATAGTCTGAAATCAATTGAAGGACTTGACATCTCATACAACATCATTTCTAACTATTTGGAGTTACAAGTCCTTTCAAGTATTCCATGTTTAAAGAATCTTTGGCTCGAAGGGAATCCCTTGTGCTGTGCTCGATGGTATCGGCCACAAGTTTTCAGCTTTTTTGCTCATCCTGAACAAGTGGAATTGGATGATAGAGAAATGAGCACAAGAGAGTCTTGGAAGAGGCGGATAATCATTGCCAGGAGGCAGAGAAGGCCTGCAAGCTTTGGATTTTATTCTCCTGCTAGGGAAGGTAACGAAGAGGACGGGCTTGTAAATGGCAAAAGGAAGAAACTGTCTCGCTTAGCATGTATCGAAGGTGAAGATCCTGGAATGAACGTGTTTTTCGAGCATGATTTGCTATCATGTGATATGGAAATTCAAGATGAACGTGAGAATATTGTTTCTGATAGTGAAGGCGAAATCACTAGCTTGATAAACAGAATTGAGTTAATGAAAAAAGAGCGTTCTAGGTTATGGTTAGAGGACTTCAAAGATTGGATGGATCAGGGATCAGAGAATTTGATGGGTGAAAGTAAGAATGGCCAAGCAATAATGGCTTTAGGTAAAGGAAAGTTTGCTGATAAGAATTGGGGAAATGTTGGAGAGACTTCAAGATACTCAGGATATGTATCAGACTCAATCTTAGGTTCAGGAGATGATAAGAGCACAAATGCTCTAGAATTGAATTGCTCAGTTGCTGGTTCCTCTGCTGGTAACCATGGTAATCAATGGCTTGATTCTGTTAATGAAAATAGCCAAATCAAGCCTGGAACAGTTGACATGGCTTCGGAAGAGGGTAGTATGAAATTTTATCTGCATAAAGGAGAAAACTATCCCGCAATGAATGATTATAATTCCAGGACTGCTAACATAAACATAAAAGGAGTTGATATCAAGAATTTGGGTGTCTCTGTTTTGCCATCTACTGCCATAGATGATATTGTGATGTCAAAGTCATCCTCTGTGCAACATGGATCACCTCCTCACTATCAGGAGGATATTCTTCATCGCCGTGATCACTTAGAAGAAGAATTTTTGCAGCTGTCTGCAGAATCCATTTCTGTTGCATCATCTGATAGTGATACCAGCAGTGATGAAGATGCTGGACATGAAACTTTGCCACCTTCTGCCAAAATTGAGCATTTTGTTAATATAGAACCTTTGGGAAGCAAAATCAATTCTCAATTCTTGCTTCCCTCCCCAGGAAAGGGTGACAATGGACACTATTTTGTTAATGTAGGACATGTAGGGTCTTCACTAGATTTATATGCTCAACAGGCCACTAATGAGCTCAATGGAAAAAAGCATTCTGTAGAGATGTTCTGTGATATACCTCCTTCAGGAGACAATGAAGAAGATGTTGATACTTCAAGCAAACAAGATGTGGATTTCCGTAAGGAGAAAAGATCCAAAAGGAAGCCCAGAAAAAGAGTTGTTTCGCTGTCTGACGATAACAGCACGTGTTCCTGTGGCAATGATGTCAAAGATGAGCACAAAGAGGACACCATGAATGACACCAATTGCATCGAGAGATCGTGGAAGAAGTTGAGCCAGCCATCTCATGATGAGGCTGGTGTATTACCTCAGGCAAAACATTCAGTTGCAAAGGCTGGTGACCACATAGAAAATTACTTCAATGCGTGTGTGGCAGACTCTTCTGTTCATGAGACTTGCAAACAGTATGTGGCGTGCGATTGTGTACTTGAGAGAGGAACTGATTTGAGAGAAAGACAGGTGGCTGTGATTCTGAGCAATAGATGGAAGCTGCATGTACTTCTTGACAGCAGCATGCTTGATGGGTCAGGTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_79489.p1 GENE.S_Transcript_79489~~S_Transcript_79489.p1 ORF type:complete len:872 (+),score=189.63,LRR_4|PF12799.3|6.6e+02,LRR_4|PF12799.3|4.1e+02,LRR_4|PF12799.3|8.6e-05,LRR_4|PF12799.3|2.6,LRR_4|PF12799.3|0.36,LRR_8|PF13855.2|8.3e+03,LRR_8|PF13855.2|0.02,LRR_8|PF13855.2|0.0009 S_Transcript_79489:353-2968(+)
MEIVTGDRYLESLVKFVEKNAGSLIEGTLVLKLNPVGLHYVQSRLEALHELERLIAGAPVDYLRAYVSDLGDHRALEQVRRILCRLTSLKVVSVLPPPLRDPTPLSLLAFGRLKVLELRGCDLSSSAAKGLLELRNTLEKFICHNSTDALRHVFASRIADIKESPHWNRLSFVSCACNGLILMDESLQLLPVVETLDLSRNKFAKLDNLRKCTRLKHLDLGFNQLRSIASLSELTCHLSKLVLRSNALRTLRGIDSLKSIEGLDISYNIISNYLELQVLSSIPCLKNLWLEGNPLCCARWYRPQVFSFFAHPEQVELDDREMSTRESWKRRIIIARRQRRPASFGFYSPAREGNEEDGLVNGKRKKLSRLACIEGEDPGMNVFFEHDLLSCDMEIQDERENIVSDSEGEITSLINRIELMKKERSRLWLEDFKDWMDQGSENLMGESKNGQAIMALGKGKFADKNWGNVGETSRYSGYVSDSILGSGDDKSTNALELNCSVAGSSAGNHGNQWLDSVNENSQIKPGTVDMASEEGSMKFYLHKGENYPAMNDYNSRTANINIKGVDIKNLGVSVLPSTAIDDIVMSKSSSVQHGSPPHYQEDILHRRDHLEEEFLQLSAESISVASSDSDTSSDEDAGHETLPPSAKIEHFVNIEPLGSKINSQFLLPSPGKGDNGHYFVNVGHVGSSLDLYAQQATNELNGKKHSVEMFCDIPPSGDNEEDVDTSSKQDVDFRKEKRSKRKPRKRVVSLSDDNSTCSCGNDVKDEHKEDTMNDTNCIERSWKKLSQPSHDEAGVLPQAKHSVAKAGDHIENYFNACVADSSVHETCKQYVACDCVLERGTDLRERQVAVILSNRWKLHVLLDSSMLDGSG*

Click here to download the sequence:
Link to NCBI Protein BLAST