Transcript Information: S_Transcript_79558.p1


Annotated TAIR IDAT3G52140.4
Annotated Gene Nametetratricopeptide repeat (TPR)-containing protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:19333232-19341295 | Forward length=1419
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 118.672176095338
Replicate 220.448060413263
Replicate 319.948265559813
Condition 2: 8 Hour
Replicate 127.598446722877
Replicate 226.024395356417
Replicate 327.166080234076
Condition 3: 24 Hour
Replicate 115.342148996209
Replicate 215.343129300807
Replicate 314.874083892672


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_79558.p1 GENE.S_Transcript_79558~~S_Transcript_79558.p1 ORF type:complete len:1421 (+),score=356.39,CLU|PF13236.2|5.7e-86,eIF3_p135|PF12807.3|8.1e+03,eIF3_p135|PF12807.3|1.5e-47,eIF3_p135|PF12807.3|1.8e+03,TPR_12|PF13424.2|0.0028,TPR_12|PF13424.2|2.9e-10,TPR_12|PF13424.2|6e-14,TPR_10|PF13374.2|3.9e+03,TPR_10|PF13374.2|9.8e-06,TPR_10|PF13374.2|0.059,TPR_10|PF13374.2|2.4e-07,TPR_10|PF13374.2|40,CLU_N|PF15044.2|1e-20,TPR_11|PF13414.2|5.2,TPR_11|PF13414.2|0.031,TPR_11|PF13414.2|1.4e-05,TPR_11|PF13414.2|0.016 S_Transcript_79558:239-4501(+)
ATGGCAGGCAAGTCGAATAAAGGGAGGAACCGTAATAAGGGTTCTCAATCACATATGGCTCCTCCTCCTGTTGTTAACTCTTCTGAACCTCCGTCGCCGCCTGTGAATGATGATAATAGTCATACTACTCCTACTGATAAACCAACACCAACACCAACACCAAATGCGACAGACCCTCCTCCTGTTAATCCCCAACCTAATGGTGGTGACTCTCTTACCTCTGAATCTGAGGTTAAGCCCTCTCAACCTACCCATTCTAGGCAATCCCAAGGTGAACTCCATCTTTATCCTGTTTCTGTCAAGACGCTTGGTGGTGAAAAGTTGGAATTACATCTAAATCCTGGCGATTCTGTGATGGATGTAAGGCAGTTTCTCCTTGATGCACCAGAGACATGTTTTTTTACATGTTATGATTTGTTACTGCATGCAAAAGGTTCAGTCCATCATTTGGAAGACTACAATGAAATTTCTGAGGTTGCTGACATAACAAGTGGCCAATGCTCCCTGGAAATGATTGCTGCTTTATATGATGACAGATCTGTAAGGGCACATGTTCACCGCACAAGGGAATTGCTATCTCTTTCAACCCTTCATGCATCACTATCAACTTCTCTTGCTTTGCAGCATGAGACGTCACGCAGTGCTTCTGGAAGCACACAAGATTCAGTTAAAGCAGAAGTTCCAGAATTGGATGGTTTTGGTTTCATGGAGGATATTACTGGCTGTCTTAGTAGATTGTGCTCTTCCTCCTCTAGGGATATTAAGTGTGTTGAAAGTATAGTATTCTCGTCATTCAACCCGCCTCCAAGTCATAGAAGGCTTGTTGGAGATTTGATTTATTTGGATGTGGTAACTCTCGAGGGAGGCAAGTTTTGCATCACAGGAACAACAAGAATGTTCTATGTTAATTCAAGTTCTGGTAACATTCTGGATCCGAGGCCAACCAAAGGTGCCTTTGAAGCAACTACCCTTATTGGACTGTTGCAAAAAATTAGTTCAAGGTTCAAAAAAGCTTTTCGGGAAATTTTAGAGAGGAAGGCCGCTGCTCATCCATTTGAAAATGTTCAATCTTTGTTACCACCAAATGCATGGCTTGGTTCATATCCAATGCCTGACCACAATCGTGATGCTGCGAGGGCAGAGGATGCACTAACACTTACATATGGAAGTGAGCTGATTGGCATGCAAAGGGATTGGAATGAAGAGTTGCAGTCCTGTCGAGAGTTCCCTCACACAACTCCACAGGAAAGGATCCTACGTGATAGAGCTCTGTATAAAGTGACTTCTGACTTTGTTGATGCTGCAACAAATGGTGCTATTGGAGTCATTAACAGATGTATACCTCCAATTAATCCTACAGATCCTGAGTGTTTTCACATGTACGTTCACAACAATATATTCTTCAGTTTTGCTATTGATGCGGACCTGGAGCTGCTGTCCAAGAAGCACAGACCAAATAGCAGTGGGAAAATCAACCGACAAAATTTGAGTGGAAAGACTTTGGAAAAGTCCTCTGATAGAGTTGGTGAAATCTGCAATGGTGTTGAAGTGAATCGTTCATACAGAGATGGTGAGAATGGTGTTCTGGATGTAGCTTCTGATATTTCCGCTGAAGTTCAAGCAGCTGATAGTGAGCAAGCCACATATGCTTCTGCAAATAATGATCTTAAAGGCACCAAGGCATACCAGGAAGCTGATGTTCCTGGGCTTTATAATCTTGCCATGGCCATTATTGATTATAGGGGTCACAGGGTGGTTGCACAGAGTGTCTTACCAGGCATCCTTCAAGGTGATAAATCAGATTCTCTTTTATATGGCTCTGTGGACAATGGAAAAAAGATATGCTGGAATGAAGACTTTCATTGCAAGGTACTTGAGGCTGCGAAACGCCTTCACTTGAAGGAACATACTGTGTGTGATGAGTCTGGAAACACGTTCAGATTAGCTGCCCCTGTGGAATGCAAGGGTATAGTTGGTAGTGATGACAGGCATTATCTTCTCGACTTGATGAGAGTCACACCTCGTGATGCTAATTACATTGGACCTGGTTCTCGGTTCTGCATTTTGAGGCCTGAGTTAATAAAAGCATTCTGCCAAGCTAAAGCTGCAGGGAGGCCTAATAGTACGCCTGATTCAGAAGCGGATGGTTGCTTGGGTGCTGAATTCTCTAATACTAATCTTGAGGTTGGATCTGATTCAAATGCAGAAGTAGCTTTGAGCAGCCAGGACCCGGCTATTGGGAGAATTATTGATATTGTCGAAGATGGCCTGTCTGCAGTCACTGGATGCAGTGAAGCAAATGAACAGATATGCTTCAATCCTAATGTATTTACAGATTTCAAATTAGCTGGATCCCCAGAAGAGATAGCAGTAGATGAAGATAATGTGAGGAAAGCAAGCTCATATCTCTCAAATGTAGTACTTCCAAAGTTTATACAGGATCTTTGCTCTCTTGAAGTTTCACCAATGGATGGTCAGACATTGACAGAAGCACTTCATGCCCACGGGATCAACGTCCGCTATATTGGAAAAATAGCTGAAGGAACCAAACATATGCCTCATCTTTGGGATCTTTGTACTAACGAGATTGCCGTAAGGGCCGCAAAGCACATGCTTAAGGATGTCTTGAGAGACACAGAGGACCATGATCTTGGCTCTTCAATAGCCCATTTCTTTAACTGTTTCTTTGGAAAATCTCAAGCGGCTACAGAGAAAAATAGCGGTAACTTGCTGCGACGATCTCAGAAAAAGGATCAAGCTGGACATCAGAAGTCTTCCAAGGGAAAGTCCAGGTGGAGGAATGGATCATCTGCTAAAAGTAGTTCATCATGGTGCTTAGGCGTAAGCTCTGATGGACTATGGTCTGATATCTTAGAATTTGCTAAAAACAAATATCAGTTTGATCTGCCGGAGGATGCAAGATCACGGGTGAAGAAAGTTTCAGTTATTCGAAATCTTTGCCAAAAGGCAGGAATAACTCTTGCGGCTCGTAAGTATGATCTTGAAGCTGTAGCATCTTTCCAAACATCAGACATCTTGAATATCCAGCATGTTGTGAAGCATGCAATACCTGTATGCTCAGAAGCCAAGAATCTTGTTGAGACCGGAAAGTTCCAGTTGGCTGAGGGAATGCTTGGTGAGGCATACACAGTGTTTTCAGAGGCATTTTCCATATTGCAGCAGGTGACTGGTCCAATGCATAGAGAGGTTGCTAACTGCTGTAGGTATCTTGCCATGGTTCTTTATCATGCTGGCGACATGGCTGGAGCTATAATGCAGCAGCACAAAGAACTGATCATAAATGAGCGTTGCCTTGGTTTGGATCATCCTGATACTGCACACAGTTATGGCAACATGGCTCTTTTCTATCATGGGCTTAACCAAACTGAGCTTGCATTACGTCACATGTCAAGAGCATTGCTTCTACTGAGCTTGTCTTCTGGCCCTGATCACCCTGATGTAGCTGCAACCTTCATTAATGTTGCAATGATGTATCAAGATATTGGAAAGATGGACACAGCTCTTAGATACCTGCAAGAAGCTCTGAAGAAGAATGAGAGGCTTCTTGGTGAGGAGCATATCCAAACTGCTGTTTGCTATCATGCTCTGGCTATTGCTTTTAATTGCATGGGGGCCTATAAACTTTCTCATCAGCATGAAAAGAAAACTTACGAGATACTGGTCAAACAACTTGGAGAGGAGGATTCTAGGACCCAGGACTCACAAAATTGGATGAAGACATTTAAAATGCGTGAGCTTCAGATGAATGCACAAAAACAGAAGGGGCAAAATCTAGATGCAGCTACTGCTAAGAAGGCAGTAGATATTATAAAGGCATTGCAGGCTGCCGCAGCAGCTGGAGGATCTAAGGGTTCCGCTTCCGTGAATAAGTCTTTGAATGCAGCTATAATGAGTGATGCTGTACCCCGTGCGAGAGGAGTTGATGAAAGGGGAGCACGTGCTGCAGCTGAAGCTCGGAAGAAAGCAGCTGCAAAGGCACACTTGACACACTCTCGTGCCGTCCCTATGCCAGTTAGTCAACTCCTGGACATTTTCGGTTCGAGTTCAGGGATTGTTTCCCAGTCCAATCTTGGTGAGGGTGAACAAGTGGACAATCACAAAAACAAAATTACTAATCCAACTGCAGTGGATGCCACAAATCCTGTCGAAGGAGAGCAACAAGCTCAGGCTCCTGTTGGTTTAGGCGCAGGTTTGGCTGCACTGGATTCCAAAAAGCTGAAAACAAAACCGACGGCTGACTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_79558.p1 GENE.S_Transcript_79558~~S_Transcript_79558.p1 ORF type:complete len:1421 (+),score=356.39,CLU|PF13236.2|5.7e-86,eIF3_p135|PF12807.3|8.1e+03,eIF3_p135|PF12807.3|1.5e-47,eIF3_p135|PF12807.3|1.8e+03,TPR_12|PF13424.2|0.0028,TPR_12|PF13424.2|2.9e-10,TPR_12|PF13424.2|6e-14,TPR_10|PF13374.2|3.9e+03,TPR_10|PF13374.2|9.8e-06,TPR_10|PF13374.2|0.059,TPR_10|PF13374.2|2.4e-07,TPR_10|PF13374.2|40,CLU_N|PF15044.2|1e-20,TPR_11|PF13414.2|5.2,TPR_11|PF13414.2|0.031,TPR_11|PF13414.2|1.4e-05,TPR_11|PF13414.2|0.016 S_Transcript_79558:239-4501(+)
MAGKSNKGRNRNKGSQSHMAPPPVVNSSEPPSPPVNDDNSHTTPTDKPTPTPTPNATDPPPVNPQPNGGDSLTSESEVKPSQPTHSRQSQGELHLYPVSVKTLGGEKLELHLNPGDSVMDVRQFLLDAPETCFFTCYDLLLHAKGSVHHLEDYNEISEVADITSGQCSLEMIAALYDDRSVRAHVHRTRELLSLSTLHASLSTSLALQHETSRSASGSTQDSVKAEVPELDGFGFMEDITGCLSRLCSSSSRDIKCVESIVFSSFNPPPSHRRLVGDLIYLDVVTLEGGKFCITGTTRMFYVNSSSGNILDPRPTKGAFEATTLIGLLQKISSRFKKAFREILERKAAAHPFENVQSLLPPNAWLGSYPMPDHNRDAARAEDALTLTYGSELIGMQRDWNEELQSCREFPHTTPQERILRDRALYKVTSDFVDAATNGAIGVINRCIPPINPTDPECFHMYVHNNIFFSFAIDADLELLSKKHRPNSSGKINRQNLSGKTLEKSSDRVGEICNGVEVNRSYRDGENGVLDVASDISAEVQAADSEQATYASANNDLKGTKAYQEADVPGLYNLAMAIIDYRGHRVVAQSVLPGILQGDKSDSLLYGSVDNGKKICWNEDFHCKVLEAAKRLHLKEHTVCDESGNTFRLAAPVECKGIVGSDDRHYLLDLMRVTPRDANYIGPGSRFCILRPELIKAFCQAKAAGRPNSTPDSEADGCLGAEFSNTNLEVGSDSNAEVALSSQDPAIGRIIDIVEDGLSAVTGCSEANEQICFNPNVFTDFKLAGSPEEIAVDEDNVRKASSYLSNVVLPKFIQDLCSLEVSPMDGQTLTEALHAHGINVRYIGKIAEGTKHMPHLWDLCTNEIAVRAAKHMLKDVLRDTEDHDLGSSIAHFFNCFFGKSQAATEKNSGNLLRRSQKKDQAGHQKSSKGKSRWRNGSSAKSSSSWCLGVSSDGLWSDILEFAKNKYQFDLPEDARSRVKKVSVIRNLCQKAGITLAARKYDLEAVASFQTSDILNIQHVVKHAIPVCSEAKNLVETGKFQLAEGMLGEAYTVFSEAFSILQQVTGPMHREVANCCRYLAMVLYHAGDMAGAIMQQHKELIINERCLGLDHPDTAHSYGNMALFYHGLNQTELALRHMSRALLLLSLSSGPDHPDVAATFINVAMMYQDIGKMDTALRYLQEALKKNERLLGEEHIQTAVCYHALAIAFNCMGAYKLSHQHEKKTYEILVKQLGEEDSRTQDSQNWMKTFKMRELQMNAQKQKGQNLDAATAKKAVDIIKALQAAAAAGGSKGSASVNKSLNAAIMSDAVPRARGVDERGARAAAEARKKAAAKAHLTHSRAVPMPVSQLLDIFGSSSGIVSQSNLGEGEQVDNHKNKITNPTAVDATNPVEGEQQAQAPVGLGAGLAALDSKKLKTKPTAD*

Click here to download the sequence:
Link to NCBI Protein BLAST