Transcript Information: S_Transcript_79609.p1


Annotated TAIR IDAT1G26670.1
Annotated Gene NameVesicle transport v-SNARE family protein
Annotated Gene Symbol(s)VTI12, ATVTI12, VTI1B
Annotation TypeOrtholog
Chromosome Positionchr1:9216103-9217793 | Forward length=222
E-Value3.6E-108
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 153.226002470361
Replicate 238.018914148217
Replicate 336.72080488074
Condition 2: 8 Hour
Replicate 163.595360410022
Replicate 259.924594570696
Replicate 352.90897887665
Condition 3: 24 Hour
Replicate 147.688160834377
Replicate 243.304068547664
Replicate 345.827553896796


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_79609.p1 GENE.S_Transcript_79609~~S_Transcript_79609.p1 ORF type:complete len:224 (+),score=51.31,V-SNARE_C|PF12352.4|8.2e+02,V-SNARE_C|PF12352.4|5.9e+03,V-SNARE_C|PF12352.4|1.1e-23,V-SNARE|PF05008.11|3.5e-23,V-SNARE|PF05008.11|2.3e+03,V-SNARE|PF05008.11|77,Sec20|PF03908.9|2.5e+03,Sec20|PF03908.9|3.2e+03,Sec20|PF03908.9|1.4e+02,Sec20|PF03908.9|1.5e-05 S_Transcript_79609:219-890(+)
ATGAGTGAGGTATTTGATGGGTATGAACGCCAGTACTGTGAGCTCTCAGCTAATCTCTCTCGAAAATGTTCTTCTGCTTCCCTTCTTCCCGATCAAGAGCAGAAGCAGCAGAAGATGACTGAAATTAAAGCAGGCCTGGAAGAGGCGGATATGTTGATAAGGAAAATGGACCTTGAAGCAAGGAGCTTGCAACCAAATGTGAAAGCGATGCTTCTTGCTAAGCTGAGGGAATATAAATCCGACTTGAATAATCTGAAGAGAGAGGTGAAGAGAATAAGTTCACCCAATCATGACCAGGCTGGACGTGAAGAGTTGCTGGAAGCTGGAATGGCAGATGTGTACAAGGCTTCTGCAGACCAGAGGGAAAGATTGGCATTTTCAACGGAAAGATTAAATCAATCAAGTGACAGAATTAGGGAGAGTAAAAGAACTATACTGGAGACAGAAGAGTTGGGTGTATCAATTCTTCAAGACTTGCATCAGCAAAGGGAAACCCTCCTACATTCACATGCCAAGCTTCATGATGTGGACAATGCCATCGACAAAAGCAAGAAGATCCTGACTTCTATGTCTCGCAGAATAAGCAAAAACAAATGGATTTTTGGTTCGGTCATTGGCGTTCTCATCCTTGCGATAATTTTTATCATCTATTTTAAGCTTACTCATCACTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_79609.p1 GENE.S_Transcript_79609~~S_Transcript_79609.p1 ORF type:complete len:224 (+),score=51.31,V-SNARE_C|PF12352.4|8.2e+02,V-SNARE_C|PF12352.4|5.9e+03,V-SNARE_C|PF12352.4|1.1e-23,V-SNARE|PF05008.11|3.5e-23,V-SNARE|PF05008.11|2.3e+03,V-SNARE|PF05008.11|77,Sec20|PF03908.9|2.5e+03,Sec20|PF03908.9|3.2e+03,Sec20|PF03908.9|1.4e+02,Sec20|PF03908.9|1.5e-05 S_Transcript_79609:219-890(+)
MSEVFDGYERQYCELSANLSRKCSSASLLPDQEQKQQKMTEIKAGLEEADMLIRKMDLEARSLQPNVKAMLLAKLREYKSDLNNLKREVKRISSPNHDQAGREELLEAGMADVYKASADQRERLAFSTERLNQSSDRIRESKRTILETEELGVSILQDLHQQRETLLHSHAKLHDVDNAIDKSKKILTSMSRRISKNKWIFGSVIGVLILAIIFIIYFKLTHH*

Click here to download the sequence:
Link to NCBI Protein BLAST