Transcript Information: S_Transcript_79735.p1


Annotated TAIR IDAT5G13010.1
Annotated Gene NameRNA helicase family protein
Annotated Gene Symbol(s)EMB3011
Annotation TypeOrtholog
Chromosome Positionchr5:4122747-4128660 | Forward length=1255
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 114.444692738846
Replicate 216.315484346187
Replicate 316.176832272396
Condition 2: 8 Hour
Replicate 118.572657196881
Replicate 218.405455568298
Replicate 318.597496899525
Condition 3: 24 Hour
Replicate 115.627754907735
Replicate 215.138580205352
Replicate 316.435515716553


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_79735.p1 GENE.S_Transcript_79735~~S_Transcript_79735.p1 ORF type:complete len:1286 (+),score=319.04,HA2|PF04408.19|3.9e-22,OB_NTP_bind|PF07717.12|1.2e-20,Helicase_C|PF00271.27|5.5e-11,DEAD|PF00270.25|2.2e-07,DUF2075|PF09848.5|5.3e-06,AAA_22|PF13401.2|5.7e-05,AAA_22|PF13401.2|2.3e+03 S_Transcript_79735:423-4280(+)
ATGATGGAGAAACATGATGATGTGCCCGTCAACATTGATACTACATTTGTCACAATGGAAGCAGAACAACCAAGTGGTGGAGGACTGTATGTACCTGGGAAAAATCGTGTTGTTTATAGACGTCCAGAGAATTCTCGCCTTGGATTGGATGCCCTTGCTCTTGCAAAAAAGGGTGCGTCAAAAGCTGATGGTGCATTTAAGGTTCCTAGAGAAGTAGTTACTTCCGTTGCAGCATCACTTGATGAAGAGGAGAAGTCAACTGTGACTGATGTAGATGAAGATAGGACAAAGATATCTAAAGGTCACCACATACGGCCTAGTAGGAGATATCGTGATGCTTCTGCAAGTGAGGATCCTGAACCAGAAAGCAGCTTAATTCAAGATACTGAAGCAAGTGATAGATCGGACAGACATCGTTCAAAACAAAGGGTTCGCTCTGAGTGCTCAATGAACAACAGAGATGACAACCTTGACAATAGAAGGATATCTAGAGATGACTCTAGAAGTGAAAGCCGGAGGGGGACGCCTAGACACAATGGACGATATGAGAGAGTTAGGGATGATGACAAAGAGAGGAGTCGGGGCACAGAGCGTGGAAGATATGAGAGAGATTACAGTAGTGGACGACATGAGAGAGGTTACAGAGGAGACTATGAAAGAAAAAGAAGCAGTTATGAAGGATCGAGAAGAACTCCTGGAAGATCAGACTGGGATGATGGTAGATGGGAATGGGAAGAAACTCCACATCGTGATGGTCACCCAAATTCTAGCCAACGCTATCAACCGTCACCATCCCCAATGTTTATCGGCACATCACCTGATGCTAGATTGGTTTCTCCTTGGCAAACACCTCGCTCTGGAGCTTCCTCCTCCCCTTGGGATCACACCGCTGCATCCCCCATGCTAATTCGAGCCTCTGGATCCTCTGTACGCTCTTCAGGCTCGCGGTATGGGGAAAGGTCAAGTCAACATAGATTTTTTACTGATGATGCACAAGTATCTGAGGACATGGATGCTGATCAAAGTTCCATTGCTGCTGAACACAATCCTGAGATCACCGAAAGCATGCGCTTGGAGATGGAGTACAATTCAGACCGTGCATGGTACGATAGAGAGGAAGGAAGCGCAACATATGATGCTGACAGCTCATCATTTTATCTTGGTGACGATGCCACAAACCAGAAGAAAGAAGTGGAACTTGCAAAACGGCTGATGAGAAGCGACGGAAGCATAATGTCACGTGCTCAAAGCAAGAAGTACTCCCAAATTAATGCTGACAAACAACAATGGGAAGATCGGCAGCTTATGAGATCTGGTGCTGTCCGAGGCACTGAAGTCCAAACTGAATTTGACAATGAGGAGGAGAACAAGGTTATTCTCTTAGTTCATGATACAAAACCTCCATTCCTTGATGGTAGAGTGGTTTTTACCAAACAAGCAGAACCAGTAATGCCACTTAAAGATCCAACATCAGATATGGCTATAATATCACGTAAAGGATCTATTTTAGTTCGGGAAATTCGTGAAAAACAAAGCATGAACAAATCACGTCAACGATTTTGGGAGCTTGCCGGTTCAAAACTTGGTGATATCCTTGGTGTTGAGAAGACAGAAGAGCAGATTGATGCTGACAAAGCTGTAGTTGGTGAAGATGGAGAAATTGATTTCAAAGAAGATGCAAAATTTGCACAGCACTTGAAGAAGGATGAGGCAGTGAGTGATTTTGCAAAGACAAAGACCCTGGCCCAGCAAAGACAGTATCTTCCTATATACTCTGTACGAGATGAGTTGCTGCAGGTAATTCGTGAGAATCAAGTAGTAGTGGTGGTGGGGGAAACAGGTTCGGGAAAGACAACTCAACTGACACAGTACTTGCATGAAGATGGTTACACTTCAAATGGTATTGTTGGGTGTACACAACCAAGGCGTGTCGCTGCCATGAGTGTTGCCAAAAGAGTTAGTGAAGAGATGGAAACAGAGCTGGGAGACAAGGTTGGTTATGCTATCCGTTTTGAGGATGTTACTGGACCCAACACCATAATCAAGTACATGACAGATGGAGTACTTCTTCGTGAAACACTGAAAGATCCTGAACTGGAGAAATACCGTGTCATTGTGATGGACGAGGCACATGAGCGGTCGCTGAATACAGATGTGCTGTTTGGAATATTAAAGAAGGTGGTTGCACAGCGGCGTGACTTTAAGTTGATTGTGACATCAGCAACCCTAAATGCAGAAAAATTTTCACTTTTTTTTGGAAGTGTCCCAATTTTCCACATCCCGGGGAGGACATTTCCTGTGAATATCTTGTACAGTAAGACTCCTTGTGAAGACTATGTTGAAGCTGCTGTGAAACAGGCTATGACTATCCACATAACCTCACCTCCTGGTGACATCCTGATATTTATGACTGGACAAGATGAGATTGAGGCAGCCTGTTATTCCCTTGCGGAACGCATGGAACAGCTGATTGCCTCAACTCAAAAGGCTGTTGCAAAGCTCCTGATACTGCCAATATACTCCCAGCTACCTGCTGACTTGCAGGCTAAAATATTCCAGAGAGCTGAAGATGGGGCACGAAAATGCATCGTAGCGACCAACATTGCTGAGACATCGCTGACTGTGGATGGAATATTTTATGTCATCGATACAGGTTATGGAAAAATGAAGGTTTACAACCCTCGGATGGGTATGGATGCTCTTCAAGTATTTCCAGTGAGCCGTGCTGCTGCTGATCAGCGTGCTGGACGTGCTGGTAGAACTGGTCCGGGCACATGTTACCGACTCTATACAGAGAGTGCATATCTGAATGAAATGCTCCCCAGTCCTGTGCCTGAAATTCAGAGGACAAACCTGGGTAATGTGGTTTTGCTGCTCAAGTCTCTCAAAATTGAAAACTTGTTAGACTTTGATTTTATGGACCCACCTCCACAAGAGAACATCCTCAACTCCATGTATCAGCTTTGGGTGTTAGGTGCCCTTAACAATGTTGGTAGCCTAACTGAGCTGGGTTGGAAAATGGTGGAATTCCCGTTGGATCCGCCTCTGGCTAAGATGCTTCTGATGGGTGAACAGCTAGGATGCATGGATGAGGTGTTGACTATCGTGTCAATGCTCTCAGTTCCAACGGTATTTTTCCGTCCTAAAGACCGGGAAGAGGAGAGTGACGCTGCTAGGGAGAAATTCTTTGTCCCTGAATCAGACCACTTGACCTTGCTTAATGTGTACCAGCAGTGGAAAAGCAATGATTACCGGGGAGACTGGTGCAATGATCACTTTCTGCAAGTTAAAGCTTTACGGAAGGCAAGGGAGGTCAGATCCCAGCTCTTGGATATTATGAAACAACTAAAGATAAAGCCGACTTCCTCACCTGATTGGGATGTTGTTAGACAAGCGATATGTTCTGCATATTTCCACAATTCTGCGAAGCAGAAGGGAATTGGCGAGTATGTCAACACCAGAAACGGCATGCCATGTCATTTGCATCCAAGCAGTGCTCTGTATGGGTTGGGTTACACACCAGAGTATGTAGTTTATCACGAGCTGCTTTTGACCTCAAAAGAGTACATGCAGTGCGTTACTGCTGTGGAACCCCAATGGCTGGCAGAGCTGGGGCCCATGTTTTTCTCAGTCAAGGAGTCTGACACATCGCTGTTGGAGCATAAGAAGAAACAAAAGCAAGAAAAGACAGCCATGGAGGAGGAGATGGAGAACTTAAGGAAGGAGCAGGCAGAGGCAGAGAGAAGAAGCAAAGAGAAGGAGAGAGAGAAAAGAGCTAAAGAACAGCAACAAATTTCAACACCAGGGTTACGACGAGGTTCTTCAACTTACCTAAGACCCAAAAAGATGGGTTTGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_79735.p1 GENE.S_Transcript_79735~~S_Transcript_79735.p1 ORF type:complete len:1286 (+),score=319.04,HA2|PF04408.19|3.9e-22,OB_NTP_bind|PF07717.12|1.2e-20,Helicase_C|PF00271.27|5.5e-11,DEAD|PF00270.25|2.2e-07,DUF2075|PF09848.5|5.3e-06,AAA_22|PF13401.2|5.7e-05,AAA_22|PF13401.2|2.3e+03 S_Transcript_79735:423-4280(+)
MMEKHDDVPVNIDTTFVTMEAEQPSGGGLYVPGKNRVVYRRPENSRLGLDALALAKKGASKADGAFKVPREVVTSVAASLDEEEKSTVTDVDEDRTKISKGHHIRPSRRYRDASASEDPEPESSLIQDTEASDRSDRHRSKQRVRSECSMNNRDDNLDNRRISRDDSRSESRRGTPRHNGRYERVRDDDKERSRGTERGRYERDYSSGRHERGYRGDYERKRSSYEGSRRTPGRSDWDDGRWEWEETPHRDGHPNSSQRYQPSPSPMFIGTSPDARLVSPWQTPRSGASSSPWDHTAASPMLIRASGSSVRSSGSRYGERSSQHRFFTDDAQVSEDMDADQSSIAAEHNPEITESMRLEMEYNSDRAWYDREEGSATYDADSSSFYLGDDATNQKKEVELAKRLMRSDGSIMSRAQSKKYSQINADKQQWEDRQLMRSGAVRGTEVQTEFDNEEENKVILLVHDTKPPFLDGRVVFTKQAEPVMPLKDPTSDMAIISRKGSILVREIREKQSMNKSRQRFWELAGSKLGDILGVEKTEEQIDADKAVVGEDGEIDFKEDAKFAQHLKKDEAVSDFAKTKTLAQQRQYLPIYSVRDELLQVIRENQVVVVVGETGSGKTTQLTQYLHEDGYTSNGIVGCTQPRRVAAMSVAKRVSEEMETELGDKVGYAIRFEDVTGPNTIIKYMTDGVLLRETLKDPELEKYRVIVMDEAHERSLNTDVLFGILKKVVAQRRDFKLIVTSATLNAEKFSLFFGSVPIFHIPGRTFPVNILYSKTPCEDYVEAAVKQAMTIHITSPPGDILIFMTGQDEIEAACYSLAERMEQLIASTQKAVAKLLILPIYSQLPADLQAKIFQRAEDGARKCIVATNIAETSLTVDGIFYVIDTGYGKMKVYNPRMGMDALQVFPVSRAAADQRAGRAGRTGPGTCYRLYTESAYLNEMLPSPVPEIQRTNLGNVVLLLKSLKIENLLDFDFMDPPPQENILNSMYQLWVLGALNNVGSLTELGWKMVEFPLDPPLAKMLLMGEQLGCMDEVLTIVSMLSVPTVFFRPKDREEESDAAREKFFVPESDHLTLLNVYQQWKSNDYRGDWCNDHFLQVKALRKAREVRSQLLDIMKQLKIKPTSSPDWDVVRQAICSAYFHNSAKQKGIGEYVNTRNGMPCHLHPSSALYGLGYTPEYVVYHELLLTSKEYMQCVTAVEPQWLAELGPMFFSVKESDTSLLEHKKKQKQEKTAMEEEMENLRKEQAEAERRSKEKEREKRAKEQQQISTPGLRRGSSTYLRPKKMGL*

Click here to download the sequence:
Link to NCBI Protein BLAST