Transcript Information: S_Transcript_79866.p1


Annotated TAIR IDAT5G24930.1
Annotated Gene NameCONSTANS-like 4
Annotated Gene Symbol(s)ATCOL4, COL4
Annotation TypeOrtholog
Chromosome Positionchr5:8589325-8590949 | Forward length=406
E-Value7.6E-99
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11579.4851528837
Replicate 21681.1611554873
Replicate 31775.9327534296
Condition 2: 8 Hour
Replicate 1296.7453517339
Replicate 2285.73063978855
Replicate 3214.00658669723
Condition 3: 24 Hour
Replicate 11815.1533693007
Replicate 21532.963382485
Replicate 31479.3364612359


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_79866.p1 GENE.S_Transcript_79866~~S_Transcript_79866.p1 ORF type:complete len:377 (+),score=43.12,CCT|PF06203.10|6e-18,zf-B_box|PF00643.20|5.2e-05,zf-B_box|PF00643.20|3.7e-06,zf-B_box|PF00643.20|1.6e+04 S_Transcript_79866:765-1895(+)
ATGGGGAGGGGATTAATGGCAGCAAAGCTATGTGACTCATGCAAGTCAGCAACAGCCACGGTGTTCTGCCGGGCTGACTCAGCATACCTGTGCATGCCATGTGACGGCAAAATCCACGCTGCCAACAAACTCGCCTCCCGCCACGCGCGTGTTTGGGTCTGTGAGGTCTGTGAGCACGCGCCGGCCAGTGTCACGTGCAAGGCTGACGCTGCTCATCTCTGTGCCACGTGCGATGACGACATCCACTCCGCCAACCCTCTCGCTCGCCGCCATGAGCGCGTCCCTCTTGCTCCTTTCTACGACTCCGCCGCCGCTGCTGCCGCCGAGTCTATTCCCTCCGCCGCTGCCGCCAAGTCCGCCGCCATCAGCAAGCTCTTTGGTGATGACTACTACTCCGATGCTGACGAGGCCGAGGCCGCCTCGTGGCTGTTACCGAACCCCAACCCCAACCCGAATAACAACAACAACAACACCACCAAGTCGGATCCGGATGATCAGAAGTCGATTGATTACCTGTTTGCTGGTGGAGGTGGTGGCGAGGCTGATGACATTGACCCGTACTTGGATCTGGATTTCAGCTCGGATCCTAAACCCGACCCGAGTGCTGACGGTGTGGTTCCGGATCCGGATCATAAACAAACTCAACACCACCATCAAATATCTCAGTCTTTGTACTCCATGCCTGGTTCTTACCACAGCAATCACTTTGATGGCGGCTTTGATAATAACAATAACTCTGGAGCTCCTTGCAAGCCTTTTTCTCTCTCCTCTTACAACGCTCATCCGCCTTCTCTCAGCCACAGCGTATCATCGTCATCGCTGGATTTCGGAGTGGTACCAGATGCAAGTGCGATGGCTGACGTGGCATCAACTGGATTTGAGAAGCAGCAACAGATGAAGATGGTAGGAATGGATAGAGAGGCAAGGGTTTTGAGGTACAGAGAGAAGAGGAAGAACAGAAAGTTCGAGAAGACTATTCGTTACGCTTCTCGGAAAGCCTACGCCGAGACCAGACCCCGTATTAAAGGCCGCTTCGCCAAACGCTCCGACGTCGAAGCCGAGGTTTCCGCCGCCTCCGTCGACGGCCTCTTCGCCTCCGATCCCGGCTACGGTGTTGTGCCATCCTTCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_79866.p1 GENE.S_Transcript_79866~~S_Transcript_79866.p1 ORF type:complete len:377 (+),score=43.12,CCT|PF06203.10|6e-18,zf-B_box|PF00643.20|5.2e-05,zf-B_box|PF00643.20|3.7e-06,zf-B_box|PF00643.20|1.6e+04 S_Transcript_79866:765-1895(+)
MGRGLMAAKLCDSCKSATATVFCRADSAYLCMPCDGKIHAANKLASRHARVWVCEVCEHAPASVTCKADAAHLCATCDDDIHSANPLARRHERVPLAPFYDSAAAAAAESIPSAAAAKSAAISKLFGDDYYSDADEAEAASWLLPNPNPNPNNNNNNTTKSDPDDQKSIDYLFAGGGGGEADDIDPYLDLDFSSDPKPDPSADGVVPDPDHKQTQHHHQISQSLYSMPGSYHSNHFDGGFDNNNNSGAPCKPFSLSSYNAHPPSLSHSVSSSSLDFGVVPDASAMADVASTGFEKQQQMKMVGMDREARVLRYREKRKNRKFEKTIRYASRKAYAETRPRIKGRFAKRSDVEAEVSAASVDGLFASDPGYGVVPSF*

Click here to download the sequence:
Link to NCBI Protein BLAST