Transcript Information: S_Transcript_79881.p1


Annotated TAIR IDAT5G65200.1
Annotated Gene Nameplant U-box 38
Annotated Gene Symbol(s)PUB38, ATPUB38
Annotation TypeOrtholog
Chromosome Positionchr5:26048173-26049843 | Reverse length=556
E-Value9E-158
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 129.194859563967
Replicate 228.525211125668
Replicate 328.111409291608
Condition 2: 8 Hour
Replicate 128.884763750445
Replicate 226.921347710119
Replicate 325.769905313485
Condition 3: 24 Hour
Replicate 125.472112279144
Replicate 223.72089234017
Replicate 321.69284043052


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_79881.p1 GENE.S_Transcript_79881~~S_Transcript_79881.p1 ORF type:complete len:536 (+),score=40.72,Arm|PF00514.19|0.0082,Arm|PF00514.19|0.002,Arm|PF00514.19|2.1e-05,Arm|PF00514.19|0.23,Arm|PF00514.19|0.14,U-box|PF04564.11|1.7e-08,HEAT_2|PF13646.2|1.2e+04,HEAT_2|PF13646.2|0.052,HEAT_2|PF13646.2|5.9e-05,HEAT_2|PF13646.2|5.9 S_Transcript_79881:778-2385(+)
ATGGGAGGAAATGGAAAGTTTCTAAAATGGAAGGTTTCCTTCTACAGGTCTTCCCAAACCAGCTCACCACCCTCACCACCTCCCGAGTACATCTGCCCTATCTGCACTGACGTCATCTCCGACCCTGTGGTTGTCGGCTCGGGTCACAGCCTGGACCGCCTCTGCGCTCAAGTCTGTCTCGATTACCGCTTCACCCCAATTCTCTCAGACGGGTCTCGCCCGGACTTTTCAGGCCAGCTATTTCCCAATTTAGCCTTGAAATTGGCCATCCAGAACTGGTGCTCACAAAACGGCGTCGCTTTGCCCTCCTCGAAGGATTACGCCGCCGTCGAGAAAATCGTCAAAGGCTTCATTGAGAAGGACCTGATTCGTCCGTCGGAGAGGTTTTTAATCGACGCCATCCCTGAGAAGCCTGATCCTGACGTGTCACACGCTGTCACCGTGTTGACTCACCGAGTCAACCGATTCGACCTCAACTCGTCCTCCAGCTCAACCTCCTCTGAGGAGTCCGTCATCGCCGTTCCTTCTAGGCCTCTCACTCCTCTGCCGTTCACCACCAAGCCTGCCTGCTGGTCTTCTTACACGTCATCGTCTTCTTCGTCGGAGATCCTGAACCCTAACCCTAGCTTCGATGAGGAATTTGTCGTGAAATTCAAGAGCTGTGACCCGTACGAGCAGGAGCAAGCTGCGATTGCGTTGAGGAAGGCTACGAGGAACGATGAAGAAGCTCGAGTTTCTCTCTGTACTCCGAGAATGTTGACGGCGTTGATATCGCTGTTGCTTTCGAGCTACGAGAAGGTTCAGGCGAACGCCATAGCTGCGCTTGTGAATCTCTCGCTTGAGAAGGAGAACAAGATCAAGATCGTCCGGTCTGGAGTTCTTCCGAATGTGATCGGTTTGTTGAAAGGAAGGTCGCCTGAGTGTCAGGAACACGCCGCCGGTGCGATCTTCTCGTTGTCGTTGGAGGATGATAACAAGACCGCCATTGGAGTACTCGGAGCTTTGCCGCCGTTGCTGCATTGCTTGACTCGGTCGGAATCGGAGCGGACTCGGTCCGACTCGGCCTTGGCGTTGTATCATCTGTCTCTCGTTCACAGCAACCGAGTCAAGCTCGTCAAACTCGGAGCGATTCCGGTTATGTTGGCGTTGTTAGGGTCGCAGAGGGAGGGGATTGCCGCGAGAGTGCTGCTCGTGCTCTGTCAACTCGCAGCGAGTTCGGAGGGGAAGGCGGCGATGTTGGATGGGAACGCGGTGGAGCATCTGGTGGGGATGTTGAGGAGAAGGAGAAACGAGTTCGAGTCCGAGTCAACTCGGGAGAACTGTGTCGCCGCGCTTTACGCGCTGAGTCATGGGAGTATGAGGTTCAAGGCGCTGGCCAAGGAGGCCCGGGCGGCCGAGGTCCTCAAGGAGGTCGAGGAGAACGGGAGCGAGCGGGCTAAGGAGAAGGCCAGGAGGATCTTATTATTGCTCAAAGCGCGGCCGCAGGATATCCATAGTGGCGGTGCTGAGGAGGTTGATTGGGAGGCTATTCTTGGATCGGATGGACTGAGTCGGACTCGCCACCGAGTTGTGGGTGCGGGCGGTGTTGGTAAATCCACCGAGTTTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_79881.p1 GENE.S_Transcript_79881~~S_Transcript_79881.p1 ORF type:complete len:536 (+),score=40.72,Arm|PF00514.19|0.0082,Arm|PF00514.19|0.002,Arm|PF00514.19|2.1e-05,Arm|PF00514.19|0.23,Arm|PF00514.19|0.14,U-box|PF04564.11|1.7e-08,HEAT_2|PF13646.2|1.2e+04,HEAT_2|PF13646.2|0.052,HEAT_2|PF13646.2|5.9e-05,HEAT_2|PF13646.2|5.9 S_Transcript_79881:778-2385(+)
MGGNGKFLKWKVSFYRSSQTSSPPSPPPEYICPICTDVISDPVVVGSGHSLDRLCAQVCLDYRFTPILSDGSRPDFSGQLFPNLALKLAIQNWCSQNGVALPSSKDYAAVEKIVKGFIEKDLIRPSERFLIDAIPEKPDPDVSHAVTVLTHRVNRFDLNSSSSSTSSEESVIAVPSRPLTPLPFTTKPACWSSYTSSSSSSEILNPNPSFDEEFVVKFKSCDPYEQEQAAIALRKATRNDEEARVSLCTPRMLTALISLLLSSYEKVQANAIAALVNLSLEKENKIKIVRSGVLPNVIGLLKGRSPECQEHAAGAIFSLSLEDDNKTAIGVLGALPPLLHCLTRSESERTRSDSALALYHLSLVHSNRVKLVKLGAIPVMLALLGSQREGIAARVLLVLCQLAASSEGKAAMLDGNAVEHLVGMLRRRRNEFESESTRENCVAALYALSHGSMRFKALAKEARAAEVLKEVEENGSERAKEKARRILLLLKARPQDIHSGGAEEVDWEAILGSDGLSRTRHRVVGAGGVGKSTEF*

Click here to download the sequence:
Link to NCBI Protein BLAST