Transcript Information: S_Transcript_79906.p2


Annotated TAIR IDATCG00860.1
Annotated Gene NameChloroplast Ycf2;ATPase, AAA type, core
Annotated Gene Symbol(s)YCF2.1
Annotation TypeOrtholog
Chromosome PositionchrC:86474-93358 | Forward length=2294
E-Value2.5E-80
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.62374221644954
Replicate 22.2407520644351
Replicate 31.7290065078376
Condition 2: 8 Hour
Replicate 11.9992553422312
Replicate 23.1460412149616
Replicate 33.6636613071062
Condition 3: 24 Hour
Replicate 13.4132630454053
Replicate 22.1247323352826
Replicate 31.7734249972347


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_79906.p2 GENE.S_Transcript_79906~~S_Transcript_79906.p2 ORF type:5prime_partial len:128 (+),score=5.35,DUF825|PF05695.8|1.1e-73 S_Transcript_79906:1-384(+)
AACTTGAATTCGGGACAGCTTTTCGAAATCTTAGTGAAGCACTGGATTTGTTATCTTATGTCTGCTTTTTGTGAAAAAATACCAATTGAAGTGGAGGGTTTCTTCAAACAACAAGGGGCTGGGTCAACTATTCAATCAAATGATATTGAGCGTGTTTCCCACCTCTTCTCGAGAAACAAGTGGGCTATTTCTTTGCAAAATTGTGCTCAATTTCATATGTGGCAATTCCACCAAGATCTCTTCGTTAGTTGGGGGAAGAATCCGTACGAATCGGATTTGTTGAGGAACATATCGAGAGAGAATTGGATTTGGTTAGACAGTGTGTGGTTGGTAAACAAGGATCGTTTTTATAAATTAATAGGGCAAATGTTACTGCAACTCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_79906.p2 GENE.S_Transcript_79906~~S_Transcript_79906.p2 ORF type:5prime_partial len:128 (+),score=5.35,DUF825|PF05695.8|1.1e-73 S_Transcript_79906:1-384(+)
NLNSGQLFEILVKHWICYLMSAFCEKIPIEVEGFFKQQGAGSTIQSNDIERVSHLFSRNKWAISLQNCAQFHMWQFHQDLFVSWGKNPYESDLLRNISRENWIWLDSVWLVNKDRFYKLIGQMLLQL*

Click here to download the sequence:
Link to NCBI Protein BLAST